1 6023 139 THE BET PROTAC INHIBITOR DBET6 PROTECTS AGAINST RETINAL DEGENERATION AND INHIBITS THE CGAS-STING IN RESPONSE TO LIGHT DAMAGE. BACKGROUND: CHRONIC INFLAMMATION SIGNIFICANTLY CONTRIBUTES TO PHOTORECEPTOR DEATH IN BLINDING RETINAL DISEASES SUCH AS AGE-RELATED MACULAR DEGENERATION (AMD) AND RETINITIS PIGMENTOSA (RP). BROMODOMAIN AND EXTRATERMINAL DOMAIN (BET) PROTEINS ARE EPIGENETIC READERS THAT ACT AS KEY PROINFLAMMATORY FACTORS. WE RECENTLY FOUND THE FIRST-GENERATION BET INHIBITOR JQ1 ALLEVIATED SODIUM IODATE-INDUCED RETINAL DEGENERATION BY SUPPRESSING CGAS-STING INNATE IMMUNITY. HERE, WE INVESTIGATED THE EFFECTS AND MECHANISM OF DBET6, A PROTEOLYSIS?TARGETING CHIMERA (PROTAC) SMALL MOLECULE THAT SELECTIVELY DEGRADES BET BY THE UBIQUITIN?PROTEASOME SYSTEM, IN LIGHT-INDUCED RETINAL DEGENERATION. METHODS: MICE WERE EXPOSED TO BRIGHT LIGHT TO INDUCE RETINAL DEGENERATION, AND THE ACTIVATION OF CGAS-STING WAS DETERMINED BY RNA-SEQUENCING AND MOLECULAR BIOLOGY. RETINAL FUNCTION, MORPHOLOGY, PHOTORECEPTOR VIABILITY AND RETINAL INFLAMMATION WERE EXAMINED IN THE PRESENCE AND ABSENCE OF DBET6 TREATMENT. RESULTS: INTRAPERITONEAL INJECTION OF DBET6 LED TO THE RAPID DEGRADATION OF BET PROTEIN IN THE RETINA WITHOUT DETECTABLE TOXICITY. DBET6 IMPROVED RETINAL RESPONSIVENESS AND VISUAL ACUITY AFTER LIGHT DAMAGE (LD). DBET6 ALSO REPRESSED LD-INDUCED RETINAL MACROPHAGES/MICROGLIA ACTIVATION, MULLER CELL GLIOSIS, PHOTORECEPTOR DEATH AND RETINAL DEGENERATION. ANALYSIS OF SINGLE-CELL RNA-SEQUENCING RESULTS REVEALED CGAS-STING COMPONENTS WERE EXPRESSED IN RETINAL MICROGLIA. LD LED TO DRAMATIC ACTIVATION OF THE CGAS-STING PATHWAY, WHEREAS DBET6 SUPPRESSED LD-INDUCED STING EXPRESSION IN REACTIVE MACROPHAGES/MICROGLIA AND THE RELATED INFLAMMATORY RESPONSE. CONCLUSIONS: THIS STUDY INDICATES TARGETED DEGRADATION OF BET BY DBET6 EXERTS NEUROPROTECTIVE EFFECTS BY INHIBITING CGAS-STING IN REACTIVE RETINAL MACROPHAGES/MICROGLIA, AND IS EXPECTED TO BECOME A NEW STRATEGY FOR TREATMENT OF RETINAL DEGENERATION. 2023 2 1904 37 ENHANCED RETINAL GANGLION CELL SURVIVAL IN GLAUCOMA BY HYPOXIC POSTCONDITIONING AFTER DISEASE ONSET. THE NEUROPROTECTIVE EFFICACY OF ADAPTIVE EPIGENETICS, WHEREIN BENEFICIAL GENE EXPRESSION CHANGES ARE INDUCED BY NONHARMFUL "CONDITIONING" STIMULI, IS NOW WELL ESTABLISHED IN SEVERAL ACUTE, PRECLINICAL CENTRAL NERVOUS SYSTEM INJURY MODELS. RECENTLY, IN A MOUSE MODEL OF GLAUCOMA, WE DEMONSTRATED RETINAL GANGLION CELL (RGC) PROTECTION BY REPETITIVELY "PRECONDITIONING" WITH HYPOXIA PRIOR TO DISEASE ONSET, INDICATING AN EPIGENETIC APPROACH MAY ALSO YIELD BENEFITS IN CHRONIC NEURODEGENERATIVE DISEASE. HEREIN, WE DETERMINED WHETHER PRESENTING THE REPETITIVE HYPOXIC STIMULUS AFTER DISEASE INITIATION [REPETITIVE HYPOXIC "POSTCONDITIONING" (RH-POST)] COULD AFFORD SIMILAR FUNCTIONAL AND MORPHOLOGIC PROTECTION AGAINST GLAUCOMATOUS RGC INJURY. CHRONIC ELEVATIONS IN INTRAOCULAR PRESSURE (IOP) WERE INDUCED UNILATERALLY IN ADULT MALE C57BL/6 MICE BY EPISCLERAL VEIN LIGATION. MICE WERE RANDOMIZED TO AN RH-POST [1 H OF SYSTEMIC HYPOXIA (11% OXYGEN) EVERY OTHER DAY, STARTING 4 DAYS AFTER IOP ELEVATION] OR AN UNTREATED CONTROL GROUP. AFTER 3 WEEKS OF EXPERIMENTAL GLAUCOMA, THE 21-27% REDUCTION AND 5-25% PROLONGATION IN FLASH VISUAL-EVOKED POTENTIAL AMPLITUDES AND LATENCIES, RESPECTIVELY, AND THE 30% IMPAIRMENT IN VISUAL ACUITY WERE ROBUSTLY IMPROVED IN RH-POST-TREATED MICE, AS WAS THE 17% LOSS IN RGC SOMA NUMBER AND 20% REDUCTION IN AXON INTEGRITY. THESE PROTECTIVE EFFECTS WERE OBSERVED WITHOUT RH-POST AFFECTING IOP. THE PRESENT FINDINGS DEMONSTRATE THAT FUNCTIONAL AND MORPHOLOGIC PROTECTION OF RGCS CAN BE REALIZED BY STIMULATING EPIGENETIC RESPONSES DURING THE EARLY STAGES OF DISEASE, AND THUS CONSTITUTE A NEW CONCEPTUAL APPROACH TO GLAUCOMA THERAPEUTICS. 2015 3 6567 33 TRANSLATOMIC RESPONSE OF RETINAL MULLER GLIA TO ACUTE AND CHRONIC STRESS. ANALYSIS OF RETINA CELL TYPE-SPECIFIC EPIGENETIC AND TRANSCRIPTOMIC SIGNATURES IS CRUCIAL TO UNDERSTANDING THE PATHOPHYSIOLOGY OF RETINAL DEGENERATIONS SUCH AS AGE-RELATED MACULAR DEGENERATION (AMD) AND DELINEATING CELL AUTONOMOUS AND CELL-NON-AUTONOMOUS MECHANISMS. WE HAVE DISCOVERED THAT ALDH1L1 IS SPECIFICALLY EXPRESSED IN THE MAJOR MACROGLIA OF THE RETINA, MULLER GLIA, AND, UNLIKE THE BRAIN, IS NOT EXPRESSED IN RETINAL ASTROCYTES. THIS ALLOWS USE OF ALDH1L1 CRE DRIVERS AND NUCLEAR TAGGING AND TRANSLATING RIBOSOME AFFINITY PURIFICATION (NUTRAP) CONSTRUCTS FOR TEMPORALLY CONTROLLED LABELING AND PAIRED ANALYSIS OF MULLER GLIA EPIGENOMES AND TRANSLATOMES. AS VALIDATED THROUGH A VARIETY OF APPROACHES, THE ALDH1L1CRE/ERT2-NUTRAP MODEL PROVIDES MULLER GLIA SPECIFIC TRANSLATOMIC AND EPIGENOMIC PROFILES WITHOUT THE NEED TO ISOLATE WHOLE CELLS. APPLICATION OF THIS APPROACH TO MODELS OF ACUTE INJURY (OPTIC NERVE CRUSH) AND CHRONIC STRESS (AGING) UNCOVERED FEW COMMON MULLER GLIA-SPECIFIC TRANSCRIPTOME CHANGES IN INFLAMMATORY PATHWAYS, AND MOSTLY DIFFERENTIAL SIGNATURES FOR EACH STIMULUS. THE EXPRESSION OF MEMBERS OF THE IL-6 AND INTEGRIN-LINKED KINASE SIGNALING PATHWAYS WAS ENHANCED IN MULLER GLIA IN RESPONSE TO OPTIC NERVE CRUSH BUT NOT AGING. UNIQUE CHANGES IN NEUROINFLAMMATION AND FIBROSIS SIGNALING PATHWAYS WERE OBSERVED IN RESPONSE TO AGING BUT NOT WITH OPTIC NERVE CRUSH. THE ALDH1L1CRE/ERT2-NUTRAP MODEL ALLOWS FOCUSED MOLECULAR ANALYSES OF A SINGLE, MINORITY CELL TYPE WITHIN THE RETINA, PROVIDING MORE SUBSTANTIAL EFFECT SIZES THAN WHOLE TISSUE ANALYSES. THE NUTRAP MODEL, NUCLEIC ACID ISOLATION, AND VALIDATION APPROACHES PRESENTED HERE CAN BE APPLIED TO ANY RETINA CELL TYPE FOR WHICH A CELL TYPE-SPECIFIC CRE IS AVAILABLE. 2022 4 809 33 CHANGES IN CLASS I AND IIB HDACS BY DELTA-OPIOID IN CHRONIC RAT GLAUCOMA MODEL. PURPOSE: THIS STUDY DETERMINES IF DELTA-OPIOID RECEPTOR AGONIST (I.E. SNC-121)-INDUCED EPIGENETIC CHANGES VIA REGULATION OF HISTONE DEACETYLASES (HDACS) FOR RETINAL GANGLION CELL (RGC) NEUROPROTECTION IN GLAUCOMA MODEL. METHODS: INTRAOCULAR PRESSURE WAS RAISED IN RAT EYES BY INJECTING 2M HYPERTONIC SALINE INTO THE LIMBAL VEINS. SNC-121 (1 MG/KG; I.P.) WAS ADMINISTERED TO THE ANIMALS FOR 7 DAYS. RETINAS WERE COLLECTED AT DAYS 7 AND 42, POST-INJURY FOLLOWED BY MEASUREMENT OF HDAC ACTIVITIES, MRNA, AND PROTEIN EXPRESSION BY ENZYME ASSAY, QUANTITATIVE REAL-TIME PCR (QRT-PCR), WESTERN BLOTTING, AND IMMUNOHISTOCHEMISTRY. RESULTS: THE VISUAL ACUITY, CONTRAST SENSITIVITY, AND PATTERN ELECTRORETINOGRAMS (ERGS) WERE DECLINED IN OCULAR HYPERTENSIVE ANIMALS, WHICH WERE SIGNIFICANTLY IMPROVED BY SNC-121 TREATMENT. CLASS I AND IIB HDACS ACTIVITIES WERE SIGNIFICANTLY INCREASED AT DAYS 7 AND 42 IN OCULAR HYPERTENSIVE ANIMALS. THE MRNA AND PROTEIN EXPRESSION OF HDAC 1 WAS INCREASED BY 1.33 +/- 0.07-FOLD AND 20.2 +/- 2.7%, HDAC 2 BY 1.4 +/- 0.05-FOLD AND 17.0 +/- 2.4%, HDAC 3 BY 1.4 +/- 0.06-FOLD AND 17.4 +/- 3.4%, AND HDAC 6 BY 1.5 +/- 0.09-FOLD AND 15.1 +/- 3.3% AT DAY 7, POST-INJURY. BOTH THE MRNA AND PROTEIN EXPRESSION OF HDACS WERE POTENTIATED FURTHER AT DAY 42 IN OCULAR HYPERTENSIVE ANIMALS. HDAC ACTIVITIES, MRNA, AND PROTEIN EXPRESSION WERE BLOCKED BY SNC-121 TREATMENT AT DAYS 7 AND 42 IN OCULAR HYPERTENSIVE ANIMALS. CONCLUSIONS: DATA SUGGESTS THAT CLASS I AND IIB HDACS ARE ACTIVATED AND UPREGULATED DURING EARLY STAGES OF GLAUCOMA. EARLY INTERVENTION WITH DELTA-OPIOID RECEPTOR ACTIVATION RESULTED IN THE PROLONGED SUPPRESSION OF CLASS I AND IIB HDACS ACTIVITIES AND EXPRESSION, WHICH MAY, IN PART, PLAY A CRUCIAL ROLE IN RGC NEUROPROTECTION. 2020 5 6453 29 THIOREDOXIN INTERACTING PROTEIN (TXNIP) INDUCES INFLAMMATION THROUGH CHROMATIN MODIFICATION IN RETINAL CAPILLARY ENDOTHELIAL CELLS UNDER DIABETIC CONDITIONS. CHRONIC HYPERGLYCEMIA AND ACTIVATION OF RECEPTOR FOR ADVANCED GLYCATION END PRODUCTS (RAGE) ARE KNOWN RISK FACTORS FOR MICROVASCULAR DISEASE DEVELOPMENT IN DIABETIC RETINOPATHY. THIOREDOXIN-INTERACTING PROTEIN (TXNIP), AN ENDOGENOUS INHIBITOR OF ANTIOXIDANT THIOREDOXIN (TRX), PLAYS A CAUSATIVE ROLE IN DIABETES AND ITS VASCULAR COMPLICATIONS. HEREIN WE INVESTIGATE WHETHER HG AND RAGE INDUCE INFLAMMATION IN RAT RETINAL ENDOTHELIAL CELLS (EC) UNDER DIABETIC CONDITIONS IN CULTURE THROUGH TXNIP ACTIVATION AND WHETHER EPIGENETIC MECHANISMS PLAY A ROLE IN INFLAMMATORY GENE EXPRESSION. WE SHOW THAT RAGE ACTIVATION BY ITS LIGAND S100B OR HG TREATMENT OF RETINAL EC INDUCES THE EXPRESSION OF TXNIP AND INFLAMMATORY GENES SUCH AS COX2, VEGF-A, AND ICAM1. TXNIP SILENCING BY SIRNA IMPEDES RAGE AND HG EFFECTS WHILE STABLE OVER-EXPRESSION OF A CDNA FOR HUMAN TXNIP IN EC ELEVATES INFLAMMATION. P38 MAPK-NF-KAPPAB SIGNALING PATHWAY AND HISTONE H3 LYSINE (K) NINE MODIFICATIONS ARE INVOLVED IN TXNIP-INDUCED INFLAMMATION. CHROMATIN IMMUNOPRECIPITATION (CHIP) ASSAYS REVEAL THAT TXNIP OVER-EXPRESSION IN EC ABOLISHES H3K9 TRI-METHYLATION, A MARKER FOR GENE INACTIVATION, AND INCREASES H3K9 ACETYLATION, AN INDICATOR OF GENE INDUCTION, AT PROXIMAL COX2 PROMOTER BEARING THE NF-KAPPAB-BINDING SITE. THESE FINDINGS HAVE IMPORTANT IMPLICATIONS TOWARD UNDERSTANDING THE MOLECULAR MECHANISMS OF OCULAR INFLAMMATION AND ENDOTHELIAL DYSFUNCTION IN DIABETIC RETINOPATHY. 2009 6 5690 32 SILENCING OF FEM1CR3 GENE EXPRESSION IN THE DBA/2J MOUSE PRECEDES RETINAL GANGLION CELL DEATH AND IS ASSOCIATED WITH HISTONE DEACETYLASE ACTIVITY. PURPOSE: DOWNREGULATION OF NORMAL GENE EXPRESSION IN DYING RETINAL GANGLION CELLS HAS BEEN DOCUMENTED IN BOTH ACUTE AND CHRONIC MODELS OF OPTIC NERVE DISEASE. THE AUTHORS EXAMINED THE MECHANISM AND TIMING OF THIS PHENOMENON IN DBA/2J MICE, USING GENETICALLY MODIFIED SUBSTRAINS OF THIS INBRED LINE. METHODS: DBA/2J MICE, DOUBLY CONGENIC FOR THE BAX MUTANT ALLELE AND THE GANGLION CELL REPORTER GENE FEM1C(ROSA3) (R3), WERE EVALUATED TO ELUCIDATE THE TIMING OF LOSS OF NORMAL GENE EXPRESSION DURING THE APOPTOTIC PROCESS. THE LOCALIZATION OF HISTONE DEACETYLASE 3 (HDAC3) AND NUCLEAR HISTONE H4 ACETYLATION WERE EXAMINED BY IMMUNOFLUORESCENCE IN DYING CELLS. THE ROLE OF HDACS IN GENE SILENCING DURING GLAUCOMA WAS INTERROGATED USING THE GLOBAL HDAC INHIBITOR TRICHOSTATIN A (TSA). RESULTS: SILENCING OF THE R3 ALLELE OCCURRED IN BAX(-/-) GANGLION CELLS, INDICATING THAT THIS PROCESS PRECEDED THE COMMITTED STEP OF THE INTRINSIC APOPTOTIC PATHWAY. WEEKLY TSA TREATMENT, BETWEEN THE AGES OF 6 AND 10 MONTHS, WAS ABLE TO ATTENUATE THE LOSS OF R3 EXPRESSION IN THE RETINA, BUT HAD NO EFFECT ON OPTIC NERVE DEGENERATION. DYING CELLS IN AGING DBA/2J MICE EXHIBITED NUCLEAR LOCALIZATION OF HDAC3 AND A DECREASE IN THE LEVEL OF H4 ACETYLATION. CONCLUSIONS: RETINAL GANGLION CELLS EXHIBIT A LOSS OF NORMAL GENE EXPRESSION AS AN EARLY (PRE-BAX INVOLVEMENT) PART OF THEIR APOPTOTIC PROGRAM DURING GLAUCOMATOUS DEGENERATION. THIS PROCESS CAN BE AMELIORATED, BUT NOT COMPLETELY BLOCKED, USING HDAC INHIBITORS. EPIGENETIC CHANGES TO ACTIVE CHROMATIN, SUCH AS DEACETYLATION, MAY BE MEDIATED BY HDAC3 IN DYING NEURONS. 2012 7 2113 35 EPIGENETIC HALLMARKS OF AGE-RELATED MACULAR DEGENERATION ARE RECAPITULATED IN A PHOTOSENSITIVE MOUSE MODEL. AGE-RELATED MACULAR DEGENERATION (AMD) IS A CHRONIC, MULTIFACTORIAL DISORDER AND A LEADING CAUSE OF BLINDNESS IN THE ELDERLY. CHARACTERIZED BY PROGRESSIVE PHOTORECEPTOR DEGENERATION IN THE CENTRAL RETINA, DISEASE PROGRESSION INVOLVES EPIGENETIC CHANGES IN CHROMATIN ACCESSIBILITY RESULTING FROM ENVIRONMENTAL EXPOSURES AND CHRONIC STRESS. HERE, WE REPORT THAT A PHOTOSENSITIVE MOUSE MODEL OF ACUTE STRESS-INDUCED PHOTORECEPTOR DEGENERATION RECAPITULATES THE EPIGENETIC HALLMARKS OF HUMAN AMD. GLOBAL EPIGENOMIC PROFILING WAS ACCOMPLISHED BY EMPLOYING AN ASSAY FOR TRANSPOSASE-ACCESSIBLE CHROMATIN USING SEQUENCING (ATAC-SEQ), WHICH REVEALED AN ASSOCIATION BETWEEN DECREASED CHROMATIN ACCESSIBILITY AND STRESS-INDUCED PHOTORECEPTOR CELL DEATH IN OUR MOUSE MODEL. THE EPIGENOMIC CHANGES INDUCED BY LIGHT DAMAGE INCLUDE REDUCED EUCHROMATIN AND INCREASED HETEROCHROMATIN ABUNDANCE, RESULTING IN TRANSCRIPTIONAL AND TRANSLATIONAL DYSREGULATION THAT ULTIMATELY DRIVES PHOTORECEPTOR APOPTOSIS AND AN INFLAMMATORY REACTIVE GLIOSIS IN THE RETINA. OF PARTICULAR INTEREST, PHARMACOLOGICAL INHIBITION OF HISTONE DEACETYLASE 11 (HDAC11) AND SUPPRESSOR OF VARIEGATION 3-9 HOMOLOG 2 (SUV39H2), KEY HISTONE-MODIFYING ENZYMES INVOLVED IN PROMOTING REDUCED CHROMATIN ACCESSIBILITY, AMELIORATED LIGHT DAMAGE IN OUR MOUSE MODEL, SUPPORTING A CAUSAL LINK BETWEEN DECREASED CHROMATIN ACCESSIBILITY AND PHOTORECEPTOR DEGENERATION, THEREBY ELUCIDATING A POTENTIAL NEW THERAPEUTIC STRATEGY TO COMBAT AMD. 2020 8 6443 37 THERAPEUTIC APPROACHES TO HISTONE REPROGRAMMING IN RETINAL DEGENERATION. RECENT DATA HAVE REVEALED EPIGENETIC DERANGEMENTS AND SUBSEQUENT CHROMATIN REMODELING AS A POTENT BIOLOGIC SWITCH FOR CHRONIC INFLAMMATION AND CELL SURVIVAL WHICH ARE IMPORTANT THERAPEUTIC TARGETS IN THE PATHOGENESIS OF SEVERAL RETINAL DEGENERATIONS. HISTONE DEACETYLASES (HDACS) ARE A MAJOR COMPONENT OF THIS SYSTEM AND SERVE AS A UNIQUE CONTROL OF THE CHROMATIN REMODELING PROCESS. WITH A MULTITUDE OF TARGETED HDAC INHIBITORS NOW AVAILABLE, THEIR USE IN BOTH BASIC SCIENCE AND CLINICAL STUDIES HAS WIDENED SUBSTANTIALLY. IN THE FIELD OF OCULAR BIOLOGY, THERE ARE DATA TO SUGGEST THAT HDAC INHIBITION MAY SUPPRESS NEOVASCULARIZATION AND MAY BE A POSSIBLE TREATMENT FOR RETINITIS PIGMENTOSA AND DRY AGE-RELATED MACULAR DEGENERATION (AMD). HOWEVER, THE EFFECTS OF THESE INHIBITORS ON CELL SURVIVAL AND CHEMOKINE EXPRESSION IN THE CHORIORETINAL TISSUES REMAIN VERY UNCLEAR. HERE, WE REVIEW THE MULTIFACETED BIOLOGY OF HDAC ACTIVITY AND PHARMACOLOGIC INHIBITION WHILE OFFERING FURTHER INSIGHT INTO THE IMPORTANCE OF THIS EPIGENETIC PATHWAY IN RETINAL DEGENERATIONS. OUR LABORATORY INVESTIGATIONS AIM TO OPEN TRANSLATIONAL AVENUES TO ADVANCE DRY AMD THERAPEUTICS WHILE EXPLORING THE ROLE OF ACETYLATION ON INFLAMMATORY GENE EXPRESSION IN THE AGING AND DEGENERATING RETINA. 2016 9 1430 23 DIFFERENTIAL EXPRESSION OF SOX11 AND BDNF MRNA ISOFORMS IN THE INJURED AND REGENERATING NERVOUS SYSTEMS. IN BOTH THE CENTRAL NERVOUS SYSTEM (CNS) AND THE PERIPHERAL NERVOUS SYSTEM (PNS), AXONAL INJURY INDUCES CHANGES IN NEURONAL GENE EXPRESSION. IN THE PNS, A RELATIVELY WELL-CHARACTERIZED ALTERATION IN TRANSCRIPTIONAL ACTIVATION IS KNOWN TO PROMOTE AXONAL REGENERATION. THIS TRANSCRIPTIONAL CASCADE INCLUDES THE NEUROTROPHIN BDNF AND THE TRANSCRIPTION FACTOR SOX11. ALTHOUGH BOTH MOLECULES ACT TO FACILITATE SUCCESSFUL AXON REGENERATION IN THE PNS, THIS PROCESS DOES NOT OCCUR IN THE CNS. THE PRESENT STUDY EXAMINES THE DIFFERENTIAL EXPRESSION OF SOX11 AND BDNF MRNA ISOFORMS IN THE PNS AND CNS USING THREE EXPERIMENTAL PARADIGMS AT DIFFERENT TIME POINTS: (I) THE ACUTELY INJURED CNS (RETINA AFTER OPTIC NERVE CRUSH) AND PNS (DORSAL ROOT GANGLION AFTER SCIATIC NERVE CRUSH), (II) A CNS REGENERATION MODEL (RETINA AFTER OPTIC NERVE CRUSH AND INDUCED REGENERATION); AND (III) THE RETINA DURING A CHRONIC FORM OF CENTRAL NEURODEGENERATION (THE DBA/2J GLAUCOMA MODEL). WE FIND AN INITIAL INCREASE OF SOX11 IN BOTH PNS AND CNS AFTER INJURY; HOWEVER, THE EXPRESSION OF BDNF ISOFORMS IS HIGHER IN THE PNS RELATIVE TO THE CNS. SUSTAINED UPREGULATION OF SOX11 IS SEEN IN THE INJURED RETINA FOLLOWING REGENERATION TREATMENT, WHILE THE EXPRESSION OF TWO BDNF MRNA ISOFORMS IS SUPPRESSED. FURTHERMORE, TWO ISOFORMS OF SOX11 WITH DIFFERENT 3'UTR LENGTHS ARE PRESENT IN THE RETINA, AND THE LONG ISOFORM IS SPECIFICALLY UPREGULATED IN LATER STAGES OF GLAUCOMA. THESE RESULTS PROVIDE INSIGHT INTO THE MOLECULAR CASCADES ACTIVE DURING AXONAL INJURY AND REGENERATION IN MAMMALIAN NEURONS. 2017 10 2768 27 EXPRESSIONS OF SERUM LNCRNAS IN DIABETIC RETINOPATHY - A POTENTIAL DIAGNOSTIC TOOL. WITH INCREASING INCIDENCE OF DIABETES WORLDWIDE, THERE IS AN EVER-EXPANDING NUMBER OF PATIENTS WITH CHRONIC DIABETIC COMPLICATIONS SUCH AS DIABETIC RETINOPATHY (DR), ONE OF THE LEADING CAUSES OF BLINDNESS IN THE WORKING AGE POPULATION. EARLY SCREENING FOR THE ONSET AND SEVERITY OF DR IS ESSENTIAL FOR TIMELY INTERVENTION. WITH RECENT ADVANCEMENTS IN GENOMIC TECHNOLOGIES, EPIGENETIC ALTERATIONS IN DR ARE BEGINNING TO UNRAVEL. LONG NON-CODING RNAS (LNCRNAS), WHICH ARE KEY EPIGENETIC MEDIATORS, HAVE DEMONSTRATED IMPLICATIONS IN SEVERAL (DR) RELATED PROCESSES. BASED ON THE PREVIOUS RESEARCH, WE HAVE DEVELOPED A SERUM-BASED, MULTI-PANEL PCR TEST USING 9 LNCRNAS (ANRIL, MALAT1, WISPER, ZFAS1, H19, HOTAIR, HULC, MEG3, AND MIAT) TO IDENTIFY AND VALIDATE WHETHER THIS PANEL COULD BE USED AS A DIAGNOSTIC AND PROGNOSTIC TOOL FOR DR. WE INITIALLY USED A CELL CULTURE MODEL (HUMAN RETINAL ENDOTHELIAL CELLS) AND CONFIRMED THAT 25 MM GLUCOSE INDUCES UPREGULATIONS OF ANRIL, HOTAIR, HULC, MALAT1, AND ZFAS1, AND DOWNREGULATION OF H19 COMPARED TO 5 MM GLUCOSE CONTROLS. THEN AS AN INITIAL PROOF-OF-CONCEPT, WE TESTED VITREOUS HUMOR AND SERUM SAMPLES FROM A SMALL COHORT OF NON-DIABETIC (N=10) AND DIABETIC PATIENTS WITH PROLIFERATIVE RETINOPATHY (PDR, N=11) AND MEASURED THE LEVELS OF THE 9 LNCRNAS. DIFFERENTIAL EXPRESSIONS OF LNCRNAS WERE FOUND IN THE VITREOUS AND SERUM OF PATIENTS AND SHOWED SIGNIFICANT CORRELATIONS. WE EXPANDED OUR APPROACH AND ASSESSED THE SAME LNCRNAS USING SAMPLES FROM A LARGER COHORT OF DIABETIC (N= 59; M/F:44/15) AND NON-DIABETIC PATIENTS (N= 11; M/F:4/7). SIGNIFICANT INCREASED LNCRNA EXPRESSIONS OF ANRIL, H19, HOTAIR, HULC, MIAT, WISPER AND ZFAS1 WERE OBSERVED IN THE SERUM OF DIABETIC PATIENTS (WITH VARYING STAGES OF DR) COMPARED TO NON-DIABETICS. NO SIGNIFICANT CORRELATIONS WERE DEMONSTRATED BETWEEN LNCRNA EXPRESSIONS AND CREATININE OR GLYCATED HEMOGLOBIN (HBA1C) LEVELS. USING ROC AND FURTHER ANALYSES, WE IDENTIFIED DISTINCT LNCRNA PHENOTYPE COMBINATIONS, WHICH MAY BE USED TO IDENTIFY PATIENTS WITH DR. DATA FROM THIS STUDY INDICATE THAT A PANEL OF SERUM LNCRNAS MAY BE USED FOR A POTENTIAL SCREENING TEST FOR DR. FURTHER LARGE-SCALE STUDIES ARE NEEDED TO VALIDATE THIS NOTION. 2022 11 4304 33 MICRORNA-223 PROTECTS NEURONS FROM DEGENERATION IN EXPERIMENTAL AUTOIMMUNE ENCEPHALOMYELITIS. MULTIPLE SCLEROSIS IS A CHRONIC INFLAMMATORY, DEMYELINATING, AND NEURODEGENERATIVE DISEASE AFFECTING THE BRAIN, SPINAL CORD AND OPTIC NERVES. NEURONAL DAMAGE IS TRIGGERED BY VARIOUS HARMFUL FACTORS THAT ENGAGE DIVERSE SIGNALLING CASCADES IN NEURONS; THUS, THERAPEUTIC APPROACHES TO PROTECT NEURONS WILL NEED TO FOCUS ON AGENTS THAT CAN TARGET MULTIPLE BIOLOGICAL PROCESSES. WE HAVE THEREFORE FOCUSED OUR ATTENTION ON MICRORNAS: SMALL NON-CODING RNAS THAT PRIMARILY FUNCTION AS POST-TRANSCRIPTIONAL REGULATORS THAT TARGET MESSENGER RNAS AND REPRESS THEIR TRANSLATION INTO PROTEINS. A SINGLE MICRORNA CAN TARGET MANY FUNCTIONALLY RELATED MESSENGER RNAS MAKING MICRORNAS POWERFUL EPIGENETIC REGULATORS. DYSREGULATION OF MICRORNAS HAS BEEN DESCRIBED IN MANY NEURODEGENERATIVE DISEASES INCLUDING MULTIPLE SCLEROSIS. HERE, WE REPORT THAT TWO MICRORNAS, MIR-223-3P AND MIR-27A-3P, ARE UPREGULATED IN NEURONS IN THE EXPERIMENTAL AUTOIMMUNE ENCEPHALOMYELITIS MOUSE MODEL OF CNS INFLAMMATION AND IN GREY MATTER-CONTAINING MULTIPLE SCLEROSIS LESIONS. PRIOR WORK HAS SHOWN PERIPHERAL BLOOD MONONUCLEAR CELL CONDITIONED MEDIA CAUSES SUBLETHAL DEGENERATION OF NEURONS IN CULTURE. WE FIND OVEREXPRESSION OF MIR-27A-3P OR MIR-223-3P PROTECTS DISSOCIATED CORTICAL NEURONS FROM CONDITION MEDIA MEDIATED DEGENERATION. INTRODUCTION OF MIR-223-3P IN VIVO IN MOUSE RETINAL GANGLION CELLS PROTECTS THEIR AXONS FROM DEGENERATION IN EXPERIMENTAL AUTOIMMUNE ENCEPHALOMYELITIS. IN SILICO ANALYSIS REVEALED THAT MESSENGER RNAS INVOLVED IN GLUTAMATE RECEPTOR SIGNALLING ARE ENRICHED AS MIR-27A-3P AND MIR-223-3P TARGETS. WE OBSERVE THAT ANTAGONISM OF NMDA AND AMPA TYPE GLUTAMATE RECEPTORS PROTECTS NEURONS FROM CONDITION MEDIA DEPENDENT DEGENERATION. OUR RESULTS SUGGEST THAT MIR-223-3P AND MIR-27A-3P ARE UPREGULATED IN RESPONSE TO INFLAMMATION TO MEDIATE A COMPENSATORY NEUROPROTECTIVE GENE EXPRESSION PROGRAM THAT DESENSITIZES NEURONS TO GLUTAMATE BY TARGETING MESSENGER RNAS INVOLVED IN GLUTAMATE RECEPTOR SIGNALLING. 2019 12 3723 27 INHIBITION OF DNA METHYLTRANSFERASE OR HISTONE DEACETYLASE PROTECTS RETINAL PIGMENT EPITHELIAL CELLS FROM DNA DAMAGE INDUCED BY OXIDATIVE STRESS BY THE STIMULATION OF ANTIOXIDANT ENZYMES. EPIGENETIC MODIFICATIONS INFLUENCE DNA DAMAGE RESPONSE (DDR). IN THIS STUDY WE EXPLORED THE ROLE OF DNA METHYLATION AND HISTONE ACETYLATION IN DDR IN CELLS CHALLENGED WITH ACUTE OR CHRONIC OXIDATIVE STRESS. WE USED RETINAL PIGMENT EPITHELIAL CELLS (ARPE-19), WHICH NATIVELY ARE EXPOSED TO OXIDATIVE STRESS DUE TO PERMANENT EXPOSURE TO LIGHT AND HIGH BLOOD FLOW. WE EMPLOYED A DNA METHYLTRANSFERASE INHIBITOR - RG108 (RG), OR A HISTONE DEACETYLASE INHIBITOR - VALPROIC ACID (VA). ARPE-19 CELLS WERE EXPOSED TO TERT-BUTYL HYDROPEROXIDE, AN ACUTE OXIDATIVE STRESS INDUCER, OR GLUCOSE OXIDASE, WHICH SLOWLY LIBERATES LOW-DOSES OF HYDROGEN PEROXIDE IN THE PRESENCE OF GLUCOSE, CREATING CHRONIC CONDITIONS. VA AND RG REDUCED LEVEL OF INTRACELLULAR REACTIVE OXYGEN SPECIES AND DNA DAMAGE IN ARPE-19 CELLS IN NORMAL CONDITION AND IN OXIDATIVE STRESS. THIS PROTECTIVE EFFECT OF VA AND RG WAS ASSOCIATED WITH THE UP-REGULATED EXPRESSION OF ANTIOXIDANT ENZYME GENES: CAT, GPX1, GPX4, SOD1 AND SOD2. RG DECREASED THE NUMBER OF CELLS IN G2/M CHECKPOINT IN RESPONSE TO CHRONIC OXIDATIVE STRESS. NEITHER RG NOR VA CHANGED THE DNA REPAIR OR APOPTOSIS INDUCED BY OXIDATIVE STRESS. THEREFORE, CERTAIN EPIGENETIC MANIPULATIONS MAY PROTECT ARPE-19 CELLS FROM DETRIMENTAL EFFECTS OF OXIDATIVE STRESS BY MODULATION OF ANTIOXIDATIVE ENZYME GENE EXPRESSION, WHICH MAY BE FURTHER EXPLORED IN PHARMACOLOGICAL STUDIES ON OXIDATIVE STRESS-RELATED EYE DISEASES. 2016 13 232 22 ADAPTIVE PLASTICITY IN THE RETINA: PROTECTION AGAINST ACUTE INJURY AND NEURODEGENERATIVE DISEASE BY CONDITIONING STIMULI. ALTHOUGH BOTH PRECLINICAL AND CLINICAL CONDITIONING STUDIES IN HEART AND BRAIN LEAD THE FIELD OF CONDITIONING MEDICINE, INVESTIGATIONS OF RETINAL CONDITIONING STILL NUMBER MORE THAN 100. IN THIS BRIEF REVIEW, WE HIGHLIGHT FINDINGS TO DATE FROM ANIMAL AND CELL CULTURE MODELS OF CONDITIONING THAT PROVIDE DEMONSTRATED PROTECTION IN ACUTE AND CHRONIC RETINAL INJURY AND DISEASE MODELS. THE MULTITUDE OF STIMULI USED TO CONDITION THE RETINA, THE SIGNALING MEDIATORS AND PATHWAYS IDENTIFIED, AND THE INJURY- AND DISEASE-RESILIENT PHENOTYPES DOCUMENTED ARE DISCUSSED HEREIN, ALONG WITH OUR RECOMMENDATIONS FOR THE KINDS OF STUDIES NEEDED TO CONTINUE TO ADVANCE THIS PROMISING FIELD. IN OUR VIEW, THE ROBUST PROTECTION AFFORDED BY THESE ADAPTIVE EPIGENETIC RESPONSES TO CONDITIONING STRESS PROVIDES SIGNIFICANT INCENTIVES FOR BOTH FURTHERING OUR INVESTMENT IN BENCH RESEARCH AND UNDERWRITING CLINICAL TRIALS, SO THAT THE FULL POTENTIAL OF THIS THERAPY CAN BE REALIZED. 2018 14 6654 28 UPDATE ON PSEUDOEXFOLIATION SYNDROME PATHOGENESIS AND ASSOCIATIONS WITH INTRAOCULAR PRESSURE, GLAUCOMA AND SYSTEMIC DISEASES. PURPOSE OF REVIEW: PSEUDOEXFOLIATION (PEX) SYNDROME IS A COMMON AGE-RELATED DISORDER AFFECTING INTRAOCULAR AND EXTRAOCULAR TISSUES. THIS REVIEW FOCUSES ON RECENT PUBLICATIONS RELATED WITH THE PATHOGENESIS AND ASSOCIATIONS OF PEX SYNDROME WITH INTRAOCULAR PRESSURE (IOP), GLAUCOMA AND SYSTEMIC DISEASES. RECENT FINDINGS: IN PEX TISSUES, EXPRESSION OF LYSYL OXIDASE-LIKE 1 (LOXL1) WAS FOUND TO BE MARKEDLY DYSREGULATED. THIS MAY ADVERSELY AFFECT ELASTIN METABOLISM AND LEAD TO ELASTOTIC ALTERATION IN TISSUES SUCH AS LAMINA CRIBROSA. THERE IS INCREASING EVIDENCE THAT CELLULAR STRESS CONDITIONS AND LOW-GRADE CHRONIC INFLAMMATORY PROCESSES ARE INVOLVED IN THE PATHOGENESIS OF PEX. ALTHOUGH THERE IS AN INCREASED RISK FOR GLAUCOMA DEVELOPMENT IN PATIENTS WITH PEX AND OCULAR HYPERTENSION AS COMPARED WITH NON-PEX PATIENTS WITH OCULAR HYPERTENSION, LOXL1 SINGLE NUCLEOTIDE POLYMORPHISMS WERE NOT ASSOCIATED WITH INTRAOCULAR PRESSURE (IOP) DIFFERENCES. LACK OF ASSOCIATION OF PEX WITH ALL-CAUSE MORTALITY OR DEMENTIA HAS BEEN REPORTED RECENTLY. THE ASSOCIATION WITH VASCULAR DISEASES IS NOT CONSISTENT AMONG DIFFERENT STUDIES. SUMMARY: DESPITE THE HIGH PREVALENCE OF THE LOXL1 VARIANTS IN THE GENERAL POPULATION, A MUCH LOWER PROPORTION OF THE POPULATION DEVELOPS PEX, SUGGESTING THAT IN ADDITION TO LOXL1, OTHER GENETIC, EPIGENETIC AND ENVIRONMENTAL FACTORS MAY CONTRIBUTE TO THE DEVELOPMENT OF PEX. ALSO, LOXL1 CANNOT HELP TO IDENTIFY THOSE WITH PEX AT INCREASED RISK FOR GLAUCOMA DEVELOPMENT. INCREASED RISK FOR GLAUCOMA DEVELOPMENT IN PEX PATIENTS WHO PRESENT WITH INCREASED IOP MAY BE RELATED TO OTHER FACTORS BEYOND IOP, CONTRIBUTING TO INCREASED VULNERABILITY OF THE OPTIC NERVE TO GLAUCOMA DEVELOPMENT IN THE PRESENCE OF PEX. 2015 15 5296 31 PROTECTIVE ROLE OF SODIUM BUTYRATE, A HDAC INHIBITOR ON BETA-CELL PROLIFERATION, FUNCTION AND GLUCOSE HOMEOSTASIS THROUGH MODULATION OF P38/ERK MAPK AND APOPTOTIC PATHWAYS: STUDY IN JUVENILE DIABETIC RAT. TYPE 1 DIABETES (T1D) ALSO KNOWN AS JUVENILE DIABETES IS A CHRONIC AUTOIMMUNE DISORDER THAT PRECIPITATES IN GENETICALLY SUSCEPTIBLE INDIVIDUALS BY ENVIRONMENTAL FACTORS PARTICULARLY DURING EARLY AGE. BOTH GENETIC AND EPIGENETIC FACTORS ARE IMPLICATED IN THE BETA-CELL DEVELOPMENT, PROLIFERATION, DIFFERENTIATION AND FUNCTION. RECENT EVIDENCES SUGGESTED THAT THERE IS A LINK BETWEEN DIABETES AND HISTONE DEACETYLASES (HDACS), BECAUSE HDAC INHIBITORS PROMOTE BETA-CELL DEVELOPMENT, PROLIFERATION AND FUNCTION AS WELL AS IMPROVE GLUCOSE HOMEOSTASIS. SODIUM BUTYRATE (NAB) IS A SHORT CHAIN FATTY ACID HAVING HDAC INHIBITION ACTIVITY. THE PRESENT STUDY WAS AIMED TO INVESTIGATE THE PROTECTIVE ROLE OF NAB TREATMENT ON THE BETA-CELL PROLIFERATION, FUNCTION AND GLUCOSE HOMEOSTASIS AS WELL AS APOPTOSIS IN JUVENILE DIABETIC RAT. DIABETES WAS INDUCED BY SINGLE INJECTION OF STZ (60 MG/KG, I.P.) IN CHILLED CITRATE BUFFER, WHILE NAB (500 MG/KG/DAY) WAS ADMINISTRATED BY I.P. ROUTE FOR 21 DAYS AS PRE- AND POST-TREATMENT SCHEDULE. PLASMA GLUCOSE AND INSULIN LEVELS, HBA1C, GLUCOSE TOLERANCE, APOPTOSIS, AND EXPRESSION OF PROLIFERATING CELL NUCLEAR ANTIGEN (PCNA), P38, P53, CASPASE-3, EXTRACELLULAR SIGNAL-REGULATED KINASE-1/2 (ERK-1/2), FORKHEAD BOX PROTEIN O1 (FOXO1) AND INSULIN RECEPTOR SUBSTRATE-1 (IRS-1) AS WELL AS HISTONE ACETYLATION WERE EVALUATED. NAB TREATMENT DECREASED PLASMA GLUCOSE, HBA1C, BETA-CELL APOPTOSIS AND IMPROVED PLASMA INSULIN LEVEL AND GLUCOSE HOMEOSTASIS THROUGH HDAC INHIBITION AND HISTONE ACETYLATION IN DIABETIC ANIMAL AS COMPARED TO CONTROL. NAB TREATMENT IMPROVED THE BETA-CELL PROLIFERATION, FUNCTION AND GLUCOSE HOMEOSTASIS AS WELL AS REDUCED BETA-CELL APOPTOSIS IN JUVENILE DIABETIC RAT BY THE MODULATION OF P38/ERK MAPK AND APOPTOTIC PATHWAY. 2014 16 2473 23 EPIGENETIC TREATMENTS OF ADULT RATS PROMOTE RECOVERY FROM VISUAL ACUITY DEFICITS INDUCED BY LONG-TERM MONOCULAR DEPRIVATION. IN MAMMALS THE DEVELOPMENT OF THE VISUAL SYSTEM MAY BE ALTERED DURING A SENSITIVE PERIOD BY MODIFYING THE VISUAL INPUT TO ONE OR BOTH EYES. THESE PLASTIC PROCESSES ARE REDUCED AFTER THE END OF THE SENSITIVE PERIOD. IT HAS BEEN PROPOSED THAT REDUCED LEVELS OF PLASTICITY ARE AT THE BASIS OF THE LACK OF RECOVERY FROM EARLY VISUAL DEPRIVATION OBSERVED IN ADULT ANIMALS. A DEVELOPMENTAL DOWNREGULATION OF EXPERIENCE-DEPENDENT REGULATION OF HISTONE ACETYLATION HAS RECENTLY BEEN FOUND TO BE INVOLVED IN CLOSING THE SENSITIVE PERIOD. THEREFORE, WE TESTED WHETHER PHARMACOLOGICAL EPIGENETIC TREATMENTS INCREASING HISTONE ACETYLATION COULD BE USED TO REVERSE VISUAL ACUITY DEFICITS INDUCED BY LONG-TERM MONOCULAR DEPRIVATION INITIATED DURING THE SENSITIVE PERIOD. WE FOUND THAT CHRONIC INTRAPERITONEAL ADMINISTRATION OF VALPROIC ACID OR SODIUM BUTYRATE (TWO DIFFERENT HISTONE DEACETYLASES INHIBITORS) TO LONG-TERM MONOCULARLY DEPRIVED ADULT RATS COUPLED WITH REVERSE LID-SUTURING CAUSED A COMPLETE RECOVERY OF VISUAL ACUITY, TESTED ELECTROPHYSIOLOGICALLY AND BEHAVIORALLY. THUS, MANIPULATIONS OF THE EPIGENETIC MACHINERY CAN BE USED TO PROMOTE FUNCTIONAL RECOVERY FROM EARLY ALTERATIONS OF SENSORY INPUT IN THE ADULT CORTEX. 2010 17 1105 37 COMBINED INHIBITION OF HISTONE DEACETYLASES AND BET FAMILY PROTEINS AS EPIGENETIC THERAPY FOR NERVE INJURY-INDUCED NEUROPATHIC PAIN. CURRENT TREATMENTS FOR NEUROPATHIC PAIN HAVE OFTEN MODERATE EFFICACY AND PRESENT UNWANTED EFFECTS SHOWING THE NEED TO DEVELOP EFFECTIVE THERAPIES. ACCUMULATING EVIDENCE SUGGESTS THAT HISTONE ACETYLATION PLAYS ESSENTIAL ROLES IN CHRONIC PAIN AND THE ANALGESIC ACTIVITY OF HISTONE DEACETYLASES (HDACS) INHIBITORS IS DOCUMENTED. BROMODOMAIN AND EXTRA-TERMINAL DOMAIN (BET) PROTEINS ARE EPIGENETIC READERS THAT INTERACT WITH ACETYLATED LYSINE RESIDUES ON HISTONES, BUT LITTLE IS KNOWN ABOUT THEIR IMPLICATION IN NEUROPATHIC PAIN. THUS, THE CURRENT STUDY WAS AIMED TO INVESTIGATE THE EFFECT OF THE COMBINATION OF HDAC AND BET INHIBITORS IN THE SPARED NERVE INJURY (SNI) MODEL IN MICE. INTRANASAL ADMINISTRATION OF I-BET762 (BET INHIBITOR) OR SAHA (HDAC INHIBITOR) ATTENUATED THERMAL AND MECHANICAL HYPERSENSITIVITY AND THIS ANTIALLODYNIC ACTIVITY WAS IMPROVED BY CO-ADMINISTRATION OF BOTH DRUGS. SPINAL CORD SECTIONS OF SNI MICE SHOWED AN INCREASED EXPRESSION OF HDAC1 AND BRD4 PROTEINS AND COMBINATION PRODUCED A STRONGER REDUCTION COMPARED TO EACH EPIGENETIC AGENT ALONE. SAHA AND I-BET762, ADMINISTERED ALONE OR IN COMBINATION, COUNTERACTED THE SNI-INDUCED MICROGLIA ACTIVATION BY INHIBITING THE EXPRESSION OF IBA1, CD11B, INDUCIBLE NITRIC OXIDE SYNTHASE (INOS), THE ACTIVATION OF NUCLEAR FACTOR-KAPPAB (NF-KAPPAB) AND SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION-1 (STAT1) WITH COMPARABLE EFFICACY. CONVERSELY, THE EPIGENETIC INHIBITORS SHOWED A MODEST EFFECT ON SPINAL PROINFLAMMATORY CYTOKINES CONTENT THAT WAS SIGNIFICANTLY POTENTIATED BY THEIR COMBINATION. PRESENT RESULTS INDICATE A KEY ROLE OF ACETYLATED HISTONES AND THEIR RECRUITMENT BY BET PROTEINS ON MICROGLIA-MEDIATED SPINAL NEUROINFLAMMATION. TARGETING NEUROPATHIC PAIN WITH THE COMBINATION OF HDAC AND BET INHIBITORS MAY REPRESENT A PROMISING NEW THERAPEUTIC OPTION. 2021 18 123 24 A SYSTEMATIC REVIEW, META-ANALYSIS, AND NETWORK ANALYSIS OF DIAGNOSTIC MICRORNAS IN GLAUCOMA. GLAUCOMA IS A CHRONIC NEURODEGENERATIVE PROCESS OF THE OPTIC NERVE THAT IS THE LEADING CAUSE OF BLINDNESS WORLDWIDE, AND EARLY DIAGNOSIS OF THE DISEASE COULD GREATLY AFFECT PATIENTS' PROGNOSES. THE PATHOPHYSIOLOGY OF GLAUCOMA IS COMPLICATED BY A COMBINATION OF GENETIC AND EPIGENETIC FACTORS. DECIPHERING THE EARLY DIAGNOSTIC BIOMARKERS IN GLAUCOMA COULD ATTENUATE THE DISEASE'S GLOBAL BURDEN AND HELP US UNDERSTAND THE EXACT MECHANISMS INVOLVED IN GLAUCOMA. THE MICRORNAS ARE MEMBERS OF A LARGER FAMILY OF NON-CODING RNAS THAT PLAY AN ESSENTIAL ROLE IN THE EPIGENETIC BASIS OF GLAUCOMA. A SYSTEMATIC STUDY AND META-ANALYSIS OF DIAGNOSTIC MICRORNAS IN GLAUCOMA, JOINTLY WITH NETWORK ANALYSIS OF TARGET GENES, WERE CARRIED OUT ON PUBLISHED PAPERS ASSESSING DIFFERENTIALLY EXPRESSED MICRORNAS IN HUMAN SUBJECTS. IN TOTAL, 321 ARTICLES WERE FOUND, AND, AFTER SCREENING, SIX STUDIES WERE ELIGIBLE FOR FURTHER ANALYSIS. 52 DIFFERENTIALLY EXPRESSED MICRORNAS WERE FOUND, OF WHICH 28 AND 24 WERE UP-REGULATED AND DOWN-REGULATED, RESPECTIVELY. ONLY 12 MICRORNAS WERE QUALIFIED FOR META-ANALYSIS, WITH OVERALL SENSITIVITY AND SPECIFICITY OF 80% AND 74%, RESPECTIVELY. THEN, USING NETWORK ANALYSIS, IT BECAME APPARENT THAT THE VEGF-A, AKT1, CXCL12, AND HRAS GENES WERE THE MOST IMPORTANT TARGETS FOR THE MICRORNAS. PERTURBATIONS IN WNT SIGNALING, PROTEIN TRANSPORT, AND EXTRACELLULAR MATRIX ORGANIZATION PATHWAYS WERE DISCOVERED TO BE IMPORTANT IN THE ETIOLOGY OF GLAUCOMA USING THE COMMUNITY DETECTION APPROACH. THIS STUDY TRIES TO UNCOVER THE PROMISING MICRORNAS AND THEIR TARGET GENES THAT GOVERN THE EPIGENETICS OF GLAUCOMA. 2023 19 6172 32 THE HDAC1/C-JUN COMPLEX IS ESSENTIAL IN THE PROMOTION OF NERVE INJURY-INDUCED NEUROPATHIC PAIN THROUGH JNK SIGNALING. HISTONE DEACETYLASE INHIBITORS (HDACIS) INTERFERE WITH THE EPIGENETIC PROCESS OF HISTONE ACETYLATION AND ARE KNOWN TO HAVE ANALGESIC PROPERTIES IN MODELS OF CHRONIC INFLAMMATORY PAIN. ADMINISTRATION OF A SELECTIVE HDAC1 INHIBITOR (LG325) IN SNI-SUBJECTED MICE SIGNIFICANTLY ATTENUATED BEHAVIOR RELATED TO INJURY-INDUCED PAIN. UNDERSTANDING THE HDAC1 PATHWAY IN EPIGENETIC REGULATION OF PATHOLOGICAL PAIN IS OF GREAT MEDICAL RELEVANCE. SPARED NERVE INJURY (SNI) MICE SHOWED A SIGNIFICANT INCREASE IN THE HDAC1 PROTEIN LEVELS WITHIN SPINAL CORD IN COINCIDENCE WITH THE NOCICEPTIVE PHENOTYPE AT 1 AND 3 WEEKS AFTER NERVE INJURY. NO VARIATION IN HDAC3, DNMT3A, ACH3, MBD3 AND MECP2 LEVELS WAS DETECTED. INCREASED EXPRESSION OF HDAC1 IS ACCOMPANIED BY ACTIVATION OF THE JNK-C-JUN SIGNALING PATHWAY. A ROBUST SPINAL JNK-1 OVERPHOSPHORYLATION WAS OBSERVED POST NERVE-INJURY ALONG WITH A SELECTIVE JNK-DEPENDENT INCREASE IN P-C-JUN AND HDAC1 PROTEIN LEVELS. CO-IMMUNOPRECIPITATION EXPERIMENTS SHOWED THE PRESENCE OF A HETERODIMERIC COMPLEX BETWEEN HDAC1 AND C-JUN IN SNI MICE INDICATING THAT THESE TRANSCRIPTION FACTORS CAN ACT TOGETHER TO REGULATE TRANSCRIPTION THROUGH HETERODIMERIZATION. STIMULATION OF C-JUN PHOSPHORYLATION WAS PREVENTED BY THE SELECTIVE HDAC1 INHIBITOR LG325. WE FOUND THAT HDAC1 WAS ASSOCIATED WITH C-JUN IN NUCLEI OF SPINAL DORSAL HORN ASTROCYTES EXPRESSING JNK. ON THE OTHER HAND, THE PRESENCE OF HDAC1 AND C-JUN INTERACTION WAS NOT DETECTED IN CONTROL MICE. THESE FINDINGS PROVIDE NEW INSIGHTS INTO THE MECHANISMS UNDERLYING THE ANTI-NOCICEPTIVE ACTIVITY OF HDAC INHIBITORS. TAKEN TOGETHER, THESE DATA SUPPORT A ROLE FOR HISTONE DEACETYLASE IN THE EMERGENCE OF NEUROPATHIC PAIN. 2018 20 1036 22 CLASS I HISTONE DEACETYLASES REGULATE P53/NF-KAPPAB CROSSTALK IN CANCER CELLS. THE TRANSCRIPTION FACTORS NF-KAPPAB AND P53 AS WELL AS THEIR CROSSTALK DETERMINE THE FATE OF TUMOR CELLS UPON THERAPEUTIC INTERVENTIONS. REPLICATIVE STRESS AND CYTOKINES PROMOTE SIGNALING CASCADES THAT LEAD TO THE CO-REGULATION OF P53 AND NF-KAPPAB. CONSEQUENTLY, NUCLEAR P53/NF-KAPPAB SIGNALING COMPLEXES ACTIVATE NF-KAPPAB-DEPENDENT SURVIVAL GENES. THE 18 HISTONE DEACETYLASES (HDACS) ARE EPIGENETIC MODULATORS THAT FALL INTO FOUR CLASSES (I-IV). INHIBITORS OF HISTONE DEACETYLASES (HDACI) BECOME INCREASINGLY APPRECIATED AS ANTI-CANCER AGENTS. BASED ON THEIR EFFECTS ON P53 AND NF-KAPPAB, WE ADDRESSED WHETHER CLINICALLY RELEVANT HDACI AFFECT THE NF-KAPPAB/P53 CROSSTALK. THE CHEMOTHERAPEUTICS HYDROXYUREA, ETOPOSIDE, AND FLUDARABINE HALT CELL CYCLE PROGRESSION, INDUCE DNA DAMAGE, AND LEAD TO DNA FRAGMENTATION. THESE AGENTS CO-INDUCE P53 AND NF-KAPPAB-DEPENDENT GENE EXPRESSION IN CELL LINES FROM BREAST AND COLON CANCER AND IN PRIMARY CHRONIC LYMPHATIC LEUKEMIA (CLL) CELLS. USING SPECIFIC HDACI, WE FIND THAT THE CLASS I SUBGROUP OF HDACS, BUT NOT THE CLASS IIB DEACETYLASE HDAC6, ARE REQUIRED FOR THE HYDROXYUREA-INDUCED CROSSTALK BETWEEN P53 AND NF-KAPPAB. HDACI DECREASE THE BASAL AND STRESS-INDUCED EXPRESSION OF P53 AND BLOCK NF-KAPPAB-REGULATED GENE EXPRESSION. WE FURTHER SHOW THAT CLASS I HDACI INDUCE SENESCENCE IN PANCREATIC CANCER CELLS WITH MUTANT P53. 2017