1 2766 132 EXPRESSION, POLYMORPHISM AND METHYLATION PATTERN OF INTERLEUKIN-6 IN PERIODONTAL TISSUES. PERIODONTITIS IS CONSIDERED AN INFLAMMATORY DISORDER OF BACTERIAL ETIOLOGY THAT RESULTS IN PERIODONTAL TISSUE DESTRUCTION, AS A RESULT OF COMPLEX INTERACTIONS BETWEEN PERIODONTAL PATHOGENS, HOST AND IMMUNE RESPONSE. GENETIC AND EPIGENETIC MECHANISMS MAY MODULATE THE INDIVIDUAL RESPONSE SINCE IT IS ABLE TO INFLUENCE THE GENE EXPRESSION. THE AIM OF THIS STUDY WAS TO EVALUATE THE IMPACT OF -174 G/C POLYMORPHISM AND THE METHYLATION STATUS OF THE PROMOTER REGION OF IL-6 GENE ON THE EXPRESSION OF IL-6 IN GINGIVAL SAMPLES FROM INDIVIDUALS WITH CHRONIC PERIODONTITIS. GINGIVAL BIOPSIES WERE COLLECTED FROM 21 PATIENTS WITH CHRONIC PERIODONTITIS AND 21 CONTROLS. HISTOLOGIC SECTIONS STAINED BY HEMATOXYLIN-EOSIN WERE USED FOR HISTOPATHOLOGICAL EVALUATION. THE IL-6 GENE EXPRESSION WAS ASSESSED BY QUANTITATIVE REAL-TIME PCR. THE POLYMORPHISM IL-6 -174 C/G WAS STUDIED BY POLYMERASE CHAIN REACTION (PCR) AMPLIFICATION AND RESTRICTION ENDONUCLEASE DIGESTION (HSPII). METHYLATION-SPECIFIC POLYMERASE CHAIN REACTION WAS USED TO VERIFY THE DNA METHYLATION PATTERN. THE NUMBER OF INFLAMMATORY CELLS IN TISSUE FRAGMENTS FROM INDIVIDUALS WITH CHRONIC PERIODONTITIS WAS HIGHER THAN IN THE CONTROL GROUP AND THE INFLAMMATORY INFILTRATE WAS PREDOMINANTLY MONONUCLEAR. THE EXPRESSION OF IL-6 WAS HIGHER IN THE GROUP WITH PERIODONTITIS. IN POLYMORPHISM ASSAY, NO STATISTICAL DIFFERENCE IN THE DISTRIBUTION OF GENOTYPES AND ALLELES IN BOTH GROUPS WERE OBSERVED. THE MOST OF SAMPLES WERE PARTIALLY METHYLATED. NO DIFFERENCE WAS OBSERVED IN METHYLATION PATTERN FROM TWO DIFFERENT REGIONS OF THE IL-6 GENE AMONG GROUPS. THE HIGH EXPRESSION OF IL-6 IS AN IMPORTANT FACTOR RELATED TO CHRONIC PERIODONTITIS, BUT WAS NOT ASSOCIATED WITH METHYLATION STATUS OR THE -174 (G/C) GENETIC POLYMORPHISM, SUGGESTING THAT OTHER MECHANISMS ARE INVOLVED IN THIS GENE TRANSCRIPTION REGULATION. 2013 2 3685 28 INFLAMMATION-ASSOCIATED CANCER DEVELOPMENT IN DIGESTIVE ORGANS: MECHANISMS AND ROLES FOR GENETIC AND EPIGENETIC MODULATION. CHRONIC INFLAMMATION, REGARDLESS OF INFECTIOUS AGENTS, PLAYS IMPORTANT ROLES IN THE DEVELOPMENT OF VARIOUS CANCERS, PARTICULARLY IN DIGESTIVE ORGANS, INCLUDING HELICOBACTER PYLORI-ASSOCIATED GASTRIC CANCER, HEPATITIS C VIRUS-POSITIVE HEPATOCELLULAR CARCINOMA, AND COLITIS-ASSOCIATED COLON CANCERS. CANCER DEVELOPMENT IS CHARACTERIZED BY STEPWISE ACCUMULATION OF GENETIC AND EPIGENETIC ALTERATIONS OF VARIOUS PROTO-ONCOGENES AND TUMOR-SUPPRESSOR GENES. DURING CHRONIC INFLAMMATION, INFECTIOUS AGENTS SUCH AS H PYLORI AND HEPATITIS C VIRUS AS WELL AS INTRINSIC MEDIATORS OF INFLAMMATORY RESPONSES, INCLUDING PROINFLAMMATORY CYTOKINES AND REACTIVE OXYGEN AND NITROGEN SPECIES, CAN INDUCE GENETIC AND EPIGENETIC CHANGES, INCLUDING POINT MUTATIONS, DELETIONS, DUPLICATIONS, RECOMBINATIONS, AND METHYLATION OF VARIOUS TUMOR-RELATED GENES THROUGH VARIOUS MECHANISMS. FURTHERMORE, INFLAMMATION ALSO MODULATES THE EXPRESSIONS OF MICRORNAS THAT INFLUENCE THE PRODUCTION OF SEVERAL TUMOR-RELATED MESSENGER RNAS OR PROTEINS. THESE MOLECULAR EVENTS INDUCED BY CHRONIC INFLAMMATION WORK IN CONCERT TO ALTER IMPORTANT PATHWAYS INVOLVED IN NORMAL CELLULAR FUNCTION, AND HENCE ACCELERATE INFLAMMATION-ASSOCIATED CANCER DEVELOPMENT. AMONG THESE, RECENT STUDIES HIGHLIGHTED AN IMPORTANT ROLE OF ACTIVATION-INDUCED CYTIDINE DEAMINASE, A NUCLEOTIDE-EDITING ENZYME ESSENTIAL FOR SOMATIC HYPERMUTATION AND CLASS-SWITCH RECOMBINATION OF THE IMMUNOGLOBULIN GENE, AS A GENOMIC MODULATOR IN INFLAMMATION-ASSOCIATED CANCER DEVELOPMENT. 2012 3 2994 24 GENETIC PATHOGENESIS OF INFLAMMATION-ASSOCIATED CANCERS IN DIGESTIVE ORGANS. EPIDEMIOLOGICAL, CLINICAL, AND BIOLOGICAL STUDIES CONVINCINGLY DEMONSTRATE THAT CHRONIC INFLAMMATION PREDISPOSES TO THE DEVELOPMENT OF HUMAN CANCERS. IN DIGESTIVE ORGANS, INFLAMMATION-ASSOCIATED CANCERS INCLUDE COLITIS-ASSOCIATED COLORECTAL CANCERS, HELICOBACTER PYLORI-ASSOCIATED GASTRIC CANCER, AS WELL AS BARRETT'S ESOPHAGUS AND ESOPHAGEAL ADENOCARCINOMA ASSOCIATED WITH CHRONIC DUODENOGASTRIC-ESOPHAGEAL REFLUX. CANCER IS A GENOMIC DISEASE, AND STEPWISE ACCUMULATION OF GENETIC AND EPIGENETIC ALTERATIONS OF TUMOR-RELATED GENES LEADS TO THE DEVELOPMENT OF TUMOR CELLS. RECENT GENOME ANALYSES SHOW THAT GENETIC ALTERATIONS, WHICH ARE EVOKED BY INFLAMMATION, ARE LATENTLY ACCUMULATED IN INFLAMED EPITHELIAL CELLS OF DIGESTIVE ORGANS. PRODUCTION OF REACTIVE OXYGEN AND ABERRANT EXPRESSION OF ACTIVATION-INDUCED CYTIDINE DEAMINASE, A NUCLEOTIDE-EDITING ENZYME, COULD BE INDUCED IN INFLAMED GASTROINTESTINAL EPITHELIAL CELLS AND PLAY A ROLE AS A GENOMIC MODULATOR OF INFLAMMATION-ASSOCIATED CARCINOGENESIS. UNDERSTANDING THE MOLECULAR LINKAGE BETWEEN INFLAMMATION AND GENETIC ALTERATIONS WILL OPEN UP A NEW FIELD OF TUMOR BIOLOGY AND PROVIDE A NOVEL STRATEGY FOR THE PREVENTION OF INFLAMMATION-ASSOCIATED TUMORIGENESIS. 2021 4 105 27 A REVIEW OF MICROBIOTA AND IRRITABLE BOWEL SYNDROME: FUTURE IN THERAPIES. IRRITABLE BOWEL SYNDROME (IBS), ONE OF THE MOST FREQUENT DIGESTIVE DISORDERS, IS CHARACTERIZED BY CHRONIC AND RECURRENT ABDOMINAL PAIN AND ALTERED BOWEL HABIT. THE ORIGIN SEEMS TO BE MULTIFACTORIAL AND IS STILL NOT WELL DEFINED FOR THE DIFFERENT SUBTYPES. GENETIC, EPIGENETIC AND SEX-RELATED MODIFICATIONS OF THE FUNCTIONING OF THE NERVOUS AND IMMUNE-ENDOCRINE SUPERSYSTEMS AND REGULATION OF BRAIN-GUT PHYSIOLOGY AND BILE ACID PRODUCTION AND ABSORPTION ARE CERTAINLY INVOLVED. ACQUIRED PREDISPOSITION MAY ACT IN CONJUNCTION WITH INFECTIOUS, TOXIC, DIETARY AND LIFE EVENT-RELATED FACTORS TO ENHANCE EPITHELIAL PERMEABILITY AND ELICIT MUCOSAL MICROINFLAMMATION, IMMUNE ACTIVATION AND DYSBIOSIS. NOTABLY, STRONG EVIDENCE SUPPORTS THE ROLE OF BACTERIAL, VIRAL AND PARASITIC INFECTIONS IN TRIGGERING IBS, AND TARGETING MICROBIOTA SEEMS PROMISING IN VIEW OF THE POSITIVE RESPONSE TO MICROBIOTA-RELATED THERAPIES IN SOME PATIENTS. HOWEVER, THE LACK OF HIGHLY PREDICTIVE DIAGNOSTIC BIOMARKERS AND THE COMPLEXITY AND HETEROGENEITY OF IBS PATIENTS MAKE MANAGEMENT DIFFICULT AND UNSATISFACTORY IN MANY CASES, REDUCING PATIENT HEALTH-RELATED QUALITY OF LIFE AND INCREASING THE SANITARY BURDEN. THIS ARTICLE REVIEWS SPECIFIC ALTERATIONS AND INTERVENTIONS TARGETING THE GUT MICROBIOTA IN IBS, INCLUDING PREBIOTICS, PROBIOTICS, SYNBIOTICS, NON-ABSORBABLE ANTIBIOTICS, DIETS, FECAL TRANSPLANTATION AND OTHER POTENTIAL FUTURE APPROACHES USEFUL FOR THE DIAGNOSIS, PREVENTION AND TREATMENT OF IBS. 2018 5 36 36 A CHROMATIN ASSAY FOR HUMAN BRAIN TISSUE. CHRONIC NEUROPSYCHIATRIC ILLNESSES SUCH AS SCHIZOPHRENIA, BIPOLAR DISEASE AND AUTISM ARE THOUGHT TO RESULT FROM A COMBINATION OF GENETIC AND ENVIRONMENTAL FACTORS THAT MIGHT RESULT IN EPIGENETIC ALTERATIONS OF GENE EXPRESSION AND OTHER MOLECULAR PATHOLOGY. TRADITIONALLY, HOWEVER, EXPRESSION STUDIES IN POSTMORTEM BRAIN WERE CONFINED TO QUANTIFICATION OF MRNA OR PROTEIN. THE LIMITATIONS ENCOUNTERED IN POSTMORTEM BRAIN RESEARCH SUCH AS VARIABILITIES IN AUTOLYSIS TIME AND TISSUE INTEGRITIES ARE ALSO LIKELY TO IMPACT ANY STUDIES OF HIGHER ORDER CHROMATIN STRUCTURES. HOWEVER, THE NUCLEOSOMAL ORGANIZATION OF GENOMIC DNA INCLUDING DNA:CORE HISTONE BINDING - APPEARS TO BE LARGELY PRESERVED IN REPRESENTATIVE SAMPLES PROVIDED BY VARIOUS BRAIN BANKS. THEREFORE, IT IS POSSIBLE TO STUDY THE METHYLATION PATTERN AND OTHER COVALENT MODIFICATIONS OF THE CORE HISTONES AT DEFINED GENOMIC LOCI IN POSTMORTEM BRAIN. HERE, WE PRESENT A SIMPLIFIED NATIVE CHROMATIN IMMUNOPRECIPITATION (NCHIP) PROTOCOL FOR FROZEN (NEVER-FIXED) HUMAN BRAIN SPECIMENS. STARTING WITH MICROCOCCAL NUCLEASE DIGESTION OF BRAIN HOMOGENATES, NCHIP FOLLOWED BY QPCR CAN BE COMPLETED WITHIN THREE DAYS. THE METHODOLOGY PRESENTED HERE SHOULD BE USEFUL TO ELUCIDATE EPIGENETIC MECHANISMS OF GENE EXPRESSION IN NORMAL AND DISEASED HUMAN BRAIN. 2008 6 1575 48 DNA METHYLATION PATTERNS OF GENES RELATED TO IMMUNE RESPONSE IN THE DIFFERENT CLINICAL FORMS OF ORAL LICHEN PLANUS. BACKGROUND: THE ORAL LICHEN PLANUS IS A CHRONIC INFLAMMATORY DISEASE. ALTHOUGH ITS AETIOLOGY IS NOT WELL UNDERSTOOD, THE ROLE OF T LYMPHOCYTES IN ITS INFLAMMATORY EVENTS IS RECOGNISED. IDENTIFYING THE EPIGENETIC MECHANISMS INVOLVED IN THE PATHOGENESIS OF THIS IMMUNE-MEDIATED CONDITION IS FUNDAMENTAL FOR UNDERSTANDING THE INFLAMMATORY REACTION THAT OCCURS IN THE DISEASE. THE PURPOSE OF THIS WORK WAS TO EVALUATE THE METHYLATION PATTERN OF 21 IMMUNE RESPONSE-RELATED GENES IN THE DIFFERENT CLINICAL FORMS OF ORAL LICHEN PLANUS. METHODS: A CROSS-SECTIONAL STUDY WAS PERFORMED TO ANALYSE THE DNA METHYLATION PATTERNS IN THREE DISTINCT GROUPS OF ORAL LICHEN PLANUS: (I) RETICULAR/PLAQUE LESIONS; (II) EROSIVE LESIONS; (III) NORMAL ORAL MUCOSA (CONTROL GROUP). AFTER DNA EXTRACTION FROM BIOPSIES, THE SAMPLES WERE SUBMITTED TO DIGESTIONS BY METHYLATION-SENSITIVE AND METHYLATION-DEPENDENT ENZYMES AND DOUBLE DIGESTION. THE RELATIVE PERCENTAGE OF METHYLATED DNA FOR EACH GENE WAS PROVIDED USING REAL-TIME POLYMERASE CHAIN REACTION ARRAYS. RESULTS: HYPERMETHYLATION OF THE STAT5A GENE WAS OBSERVED ONLY IN THE CONTROL GROUP (59.0%). A HIGHER HYPERMETHYLATION OF THE ELANE GENE WAS FOUND IN RETICULAR/PLAQUE LESIONS (72.1%) COMPARED TO THE EROSIVE LESIONS (50.0%). CONCLUSION: OUR RESULTS SHOW VARIATIONS IN THE METHYLATION PROFILE OF IMMUNE RESPONSE-RELATED GENES, ACCORDING TO THE CLINICAL TYPE OF ORAL LICHEN PLANUS AFTER COMPARING WITH THE NORMAL ORAL MUCOSA. FURTHER STUDIES ARE NECESSARY TO VALIDATE THESE FINDINGS USING GENE EXPRESSION ANALYSIS. 2018 7 6179 36 THE HUMAN MALARIA PARASITE PLASMODIUM FALCIPARUM CAN SENSE ENVIRONMENTAL CHANGES AND RESPOND BY ANTIGENIC SWITCHING. THE PRIMARY ANTIGENIC AND VIRULENCE DETERMINANT OF THE HUMAN MALARIA PARASITE PLASMODIUM FALCIPARUM IS A VARIANT SURFACE PROTEIN CALLED PFEMP1. DIFFERENT FORMS OF PFEMP1 ARE ENCODED BY A MULTICOPY GENE FAMILY CALLED VAR, AND SWITCHING BETWEEN ACTIVE GENES ENABLES THE PARASITES TO EVADE THE ANTIBODY RESPONSE OF THEIR HUMAN HOSTS. VAR GENE SWITCHING IS KEY FOR THE MAINTENANCE OF CHRONIC INFECTIONS; HOWEVER, WHAT CONTROLS SWITCHING IS UNKNOWN, ALTHOUGH IT HAS BEEN SUGGESTED TO OCCUR AT A CONSTANT FREQUENCY WITH LITTLE OR NO ENVIRONMENTAL INFLUENCE. VAR GENE TRANSCRIPTION IS CONTROLLED EPIGENETICALLY THROUGH THE ACTIVITY OF HISTONE METHYLTRANSFERASES (HMTS). STUDIES IN MODEL SYSTEMS HAVE SHOWN THAT METABOLISM AND EPIGENETIC CONTROL OF GENE EXPRESSION ARE LINKED THROUGH THE AVAILABILITY OF INTRACELLULAR S-ADENOSYLMETHIONINE (SAM), THE PRINCIPAL METHYL DONOR IN BIOLOGICAL METHYLATION MODIFICATIONS, WHICH CAN FLUCTUATE BASED ON NUTRIENT AVAILABILITY. TO DETERMINE WHETHER ENVIRONMENTAL CONDITIONS AND CHANGES IN METABOLISM CAN INFLUENCE VAR GENE EXPRESSION, P. FALCIPARUM WAS CULTURED IN MEDIA WITH ALTERED CONCENTRATIONS OF NUTRIENTS INVOLVED IN SAM METABOLISM. WE FOUND THAT CONDITIONS THAT INFLUENCE LIPID METABOLISM INDUCE VAR GENE SWITCHING, INDICATING THAT PARASITES CAN RESPOND TO CHANGES IN THEIR ENVIRONMENT BY ALTERING VAR GENE EXPRESSION PATTERNS. GENETIC MODIFICATIONS THAT DIRECTLY MODIFIED EXPRESSION OF THE ENZYMES THAT CONTROL SAM LEVELS SIMILARLY LED TO PROFOUND CHANGES IN VAR GENE EXPRESSION, CONFIRMING THAT CHANGES IN SAM AVAILABILITY MODULATE VAR GENE SWITCHING. THESE OBSERVATIONS DIRECTLY CHALLENGE THE PARADIGM THAT ANTIGENIC VARIATION IN P. FALCIPARUM FOLLOWS AN INTRINSIC, PROGRAMED SWITCHING RATE, WHICH OPERATES INDEPENDENTLY OF ANY EXTERNAL STIMULI. 2023 8 5869 36 SUSCEPTIBILITY TO STRESS-INDUCED VISCERAL SENSITIVITY: A BAD LEGACY FOR NEXT GENERATIONS. DESPITE HIGH PREVALENCE, THE PRECISE IRRITABLE BOWEL SYNDROME (IBS) PATHOPHYSIOLOGY REMAINS POORLY UNDERSTOOD LIKELY DUE TO THE HETEROGENEITY OF IBS POPULATIONS AND THE MULTIFACTORIAL ETIOLOGY OF THIS DISORDER. AMONG RISK FACTORS, GENETIC PREDISPOSITION AND EARLY LIFE TRAUMA HAVE BEEN REPORTED. IN THIS CONTEXT, THE DEBATE ON GENETIC OR ENVIRONMENTAL INFLUENCES IN THE IBS PATHOGENESIS IS STILL OPEN. THE STUDY BY VAN DER WIJNGAARD ET AL., REPORTING FOR THE FIRST TIME THAT SUSCEPTIBILITY TO STRESS-INDUCED VISCERAL HYPERSENSITIVITY IN MATERNALLY SEPARATED RATS CAN BE TRANSFERRED TO THE NEXT GENERATION WITHOUT ANY FURTHER EXPOSURE OF F2 INDIVIDUALS TO MATERNAL SEPARATION, SUPPORTS THE IMPORTANCE OF ENVIRONMENTAL INFLUENCE IN THE IBS PHENOTYPE. EPIGENETIC MECHANISMS SUCH AS HYPERMETHYLATION IN THE PROMOTER REGION OF THE GLUCOCORTICOID RECEPTOR GENE MEDIATING THE LONG-TERM AND TRANSGENERATIONAL BEHAVIORAL EFFECTS OF MATERNAL CARE ON THE DEVELOPMENT HAVE BEEN SHOWN IN SOME BUT NOT IN ALL STUDIES. VAN DER WIJNGAARD ET AL. INCRIMINATED MATERNAL CARE IN THE TRANSMITTED SUSCEPTIBILITY TO STRESS-INDUCED VISCERAL HYPERSENSITIVITY, BUT NOT CHANGES IN GLUCOCORTICOID RECEPTOR PROTEIN EXPRESSION IN THE BRAIN. THIS FINDING OPENS A BROAD FIELD OF FUTURE DIRECTIONS AIMED AT EVALUATING THE MECHANISMS INVOLVED IN THE TRANSMISSION ACROSS GENERATIONS OF THE DIGESTIVE FEATURES OF IBS, INCLUDING, FOR EXAMPLE, ON THE ROLE OF GUT MICROBIOTA CHANGES IN VERTICAL TRANSMISSION OR EPIGENETIC MODIFICATIONS OF INTESTINAL MAST CELLS AND THE JUNCTIONAL REGION OF INTESTINAL EPITHELIAL CELLS IN VERTICAL TRANSFER. 2013 9 6837 27 [INTERSTITIAL CYSTITIS: THE LATEST FINDINGS ON ITS AETIOPATHOGENESIS]. NEW FINDINGS PROVIDE PROGRESS IN THE UNDERSTANDING OF THE COMPLICATED AETIOPATHOGENESIS OF INTERSTITIAL CYSTITIS/BLADDER PAIN SYNDROME (IC/BPS), WHOSE CAUSALITIES HAVE ONLY BEEN DECIPHERED IN FRAGMENTS SO FAR. AN INCREASINGLY COMPLEX NETWORK OF PATHOMECHANISMS IS EMERGING, IN WHICH THE FREQUENTLY MENTIONED MAST CELLS AND UROTHELIAL CHANGES SEEM TO BE ONLY A FRAGMENT OF THE PATHOLOGICAL CHANGES. THE LATEST FINDINGS REGARDING A POSSIBLE GENETIC AND EPIGENETIC PREDISPOSITION ARE BASED ON PEDIGREE ANALYSES, DETECTION OF SINGLE NUCLEOTIDE POLYMORPHISMS AND SIGNIFICANT CHANGES IN DIFFERENTIALLY EXPRESSED GENES. MULTIPLE ALTERATIONS CAN BE DETECTED AT THE MOLECULAR LEVEL. PLATELET-ACTIVATING FACTOR, VEGF, CORTICOTROPIN-RELEASING HORMONE AND THE INFLAMMASOME ARE IMPORTANT PLAYERS IN UNDERSTANDING THE DISEASE, BUT THE PATHOMECHANISM UNDERLYING THE "ACTIVATION" OF IC REMAINS UNCLEAR. NEW STARTING POINTS COULD BE THE DETECTION OF VIRUSES (EPSTEIN-BARR VIRUS, BK POLYOMAVIRUSES) OR BACTERIAL INFLAMMATION BY PATHOGENS THAT CANNOT BE DETECTED IN STANDARD CULTURES. 2021 10 4428 33 MOLECULAR BASIS OF THE IRRITABLE BOWEL SYNDROME. IRRITABLE BOWEL SYNDROME (IBS) IS A FUNCTIONAL DISORDER CHARACTERIZED BY ABDOMINAL PAIN, DISCOMFORT AND BLOATING. THE PATHOPHYSIOLOGY OF IBS IS POORLY UNDERSTOOD, BUT THE PRESENCE OF PSYCHOSOCIAL BASIS IS NOW KNOWN. THERE IS AN INCREASING NUMBER OF PUBLICATIONS SUPPORTING THE ROLE OF GENETICS IN IBS. MOST OF THE VARIATIONS ARE FOUND IN GENES ASSOCIATED WITH THE BRAIN-GUT AXIS, REVEALING THE STRONG CORRELATION OF BRAIN-GUT AXIS AND IBS. MIRNAS, WHICH PLAY CRITICAL ROLES IN PHYSIOLOGICAL PROCESSES, ARE NOT WELL STUDIED IN IBS. HOWEVER, SO FAR THERE IS FOUND AN INVOLVEMENT OF ALTERATIONS IN MIRNA EXPRESSION OR SEQUENCE, IN IBS SYMPTOMS. IBS PHENOTYPE IS AFFECTED BY EPIGENETIC ALTERATION AND ENVIRONMENT. CHANGES IN DNA AND HISTONE METHYLATION ARE OBSERVED IN PATIENTS WHO SUFFERED CHILDHOOD TRAUMA OR ABUSE, RESULTING IN ALTERED GENE EXPRESSION, SUCH AS THE GLUCOCORTICOID RECEPTOR GENE. FINALLY, DIET IS ANOTHER FACTOR ASSOCIATED WITH IBS, WHICH MAY CONTRIBUTE TO SYMPTOM ONSET. CERTAIN FOODS MAY AFFECT ON BACTERIAL METABOLISM AND EPIGENETIC MODIFICATIONS, PREDISPOSING TO IBS. 2014 11 6273 23 THE ORIGINS OF GASTRIC CANCER FROM GASTRIC STEM CELLS: LESSONS FROM MOUSE MODELS. THE CELLULAR ORIGIN OF DIGESTIVE CANCERS HAS BEEN A LONG-STANDING QUESTION IN THE CANCER FIELD. MOUSE MODELS HAVE IDENTIFIED LONG-LIVED STEM CELLS IN MOST ORGAN SYSTEMS, INCLUDING THE LUMINAL GASTROINTESTINAL TRACT, AND NUMEROUS STUDIES HAVE POINTED TO TISSUE RESIDENT STEM CELLS AS THE MAIN CELLULAR ORIGIN OF CANCER. DURING GASTRIC CARCINOGENESIS, CHRONIC INFLAMMATION INDUCES GENETIC AND EPIGENETIC ALTERATIONS IN LONG-LIVED STEM CELLS, ALONG WITH EXPANSION OF STEM CELL NICHES, EVENTUALLY LEADING TO INVASIVE CANCER. THE GASTRIC CORPUS AND ANTRUM HAVE DISTINCT STEM CELLS AND STEM CELL NICHES, SUGGESTING DIFFERENTIAL REGULATION OF CANCER INITIATION AT THE 2 SITES. IN THIS SHORT REVIEW, WE DISCUSS RECENT EXPERIMENTAL MODELS AND HUMAN STUDIES, WHICH PROVIDE IMPORTANT INSIGHTS INTO THE PATHOGENESIS OF GASTRIC CANCER. 2017 12 6723 42 VITAMIN D RECEPTOR GENE METHYLATION IN HEPATOCELLULAR CARCINOMA. WORLDWIDE, HEPATOCELLULAR CARCINOMA (HCC) IS THE MAJOR SUBTYPE OF PRIMARY LIVER CANCERS. HCC IS TYPICALLY DIAGNOSED LATE IN ITS COURSE. WITH RESPECT TO CANCER, THE GENOMIC ACTIONS OF VITAMIN D ARE MEDIATED THROUGH BINDING TO THE VITAMIN D RECEPTOR (VDR), WHICH ALLOWS IT TO MODULATE THE EXPRESSION OF GENES IN A CELL-AND TISSUE-SPECIFIC MANNER. EPIGENETICS IS A RAPIDLY EVOLVING FIELD OF GENETIC STUDY APPLICABLE TO HCC. CHANGES IN DNA METHYLATION PATTERNS ARE THOUGHT TO BE EARLY EVENTS IN HEPATOCARCINOGENESIS. CURCUMIN HAS GREAT POTENTIAL AS AN EPIGENETIC AGENT. ACCORDINGLY, THE CURRENT STUDY HAS BEEN DESIGNED TO STUDY THE METHYLATION STATUS OF VDR GENE PROMOTER FOR THE FIRST TIME IN HCC AIMING TO FIND ITS CLINICAL SIGNIFICANCE AND POTENTIAL SCREENING ROLE IN CHRONIC LIVER DISEASE (CLD). ADDITIONALLY, WE AIMED TO INVESTIGATE, THE EFFECT OF CURCUMIN ON HCC CELL LINE, AIMING TO DISCOVER NEW THERAPEUTIC TARGETS THROUGH EPIGENETICS. THIS STUDY WAS CONDUCTED ON 45 FORMALIN-FIXED, PARAFFIN-EMBEDDED LIVER TISSUE BLOCKS INCLUDING 15 HCC SAMPLES (GROUP A), 15 CLD SAMPLES (GROUP B) AND 15 APPARENTLY NORMAL TISSUE TAKEN FROM AROUND BENIGN LESIONS (GROUP C). METHYLATION SPECIFIC RESTRICTION DIGESTION AND QPCR WERE DONE ON ALL SAMPLES AFTER DNA EXTRACTION. THE PERCENTAGE OF VDR GENE PROMOTER METHYLATION WAS SIGNIFICANTLY HIGHER IN THE HCC GROUP COMPARED TO BOTH CLD AND CONTROL GROUPS (P < 0.01). VDR PROMOTER METHYLATION BY (MS-QPCR) WAS DECREASED AND THE RELATIVE EXPRESSION OF VDR BY (QRT-PCR) WAS MARKEDLY INCREASED IN A DOSE-DEPENDENT FASHION IN CELLS GROWN IN CURCUMIN-ADEQUATE MEDIUM. IN CONCLUSION, THIS STUDY MAY OPEN A NEW GATE FOR THE USE OF VDR PROMOTER METHYLATION AS A POTENTIAL BIOMARKER IN HCC. 2018 13 3440 52 HYPERMETHYLATION AND LOW TRANSCRIPTION OF TLR2 GENE IN CHRONIC PERIODONTITIS. PERIODONTITIS IS AN INFLAMMATORY DISORDER CHARACTERIZED BY INTERACTIONS BETWEEN PERIODONTAL PATHOGENS AND HOST'S IMMUNE RESPONSE. EPIGENETIC MAY CONTRIBUTE TO DISEASE DEVELOPMENT AND OUTCOME BY INFLUENCING THE EXPRESSION OF GENES INVOLVED IN THE IMMUNE RESPONSE. IT HAS BEEN SHOWN THAT TOLL-LIKE RECEPTORS (TLR) PLAY AN IMPORTANT ROLE IN THE RESPONSE TO PERIODONTOPATHIC BACTERIA. THE AIM OF STUDY WAS TO EVALUATE THE METHYLATION STATUS AND THE EXPRESSION OF TLR2 GENE IN GINGIVAL SAMPLES FROM INDIVIDUALS WITH AND WITHOUT PERIODONTITIS. DNA WAS ANALYZED USING THE METHYL PROFILER DNA METHYLATION QPCR ASSAY. DNA METHYLATION AND TRANSCRIPT LEVELS WERE EVALUATED BY REAL-TIME POLYMERASE CHAIN REACTION. THE PERIODONTITIS GROUP SHOWED A HYPERMETHYLATED PROFILE AND A LOW EXPRESSION OF GENE. POSITIVE CORRELATION BETWEEN THE TLR2 METHYLATION FREQUENCY AND PROBING DEPTH WAS OBSERVED. THIS STUDY GIVES THE FIRST EVIDENCE OF METHYLATION FREQUENCY IN INFLAMED PERIODONTAL TISSUES AND OF THE POSSIBLE PARTICIPATION OF METHYLATION IN THE DEVELOPMENT OF PERIODONTITIS. 2013 14 2918 34 GENE-ENVIRONMENT INTERACTIONS IN MAJOR MENTAL DISORDERS IN THE CZECH REPUBLIC. BACKGROUND: MENTAL DISORDERS AFFECT ABOUT ONE?-THIRD OF THE HUMAN POPULATION, ARE TYPICALLY CHRONIC AND SIGNIFICANTLY DECREASE THE QUALITY OF LIFE. PRESENTLY, THE TREATMENT OF MENTAL ILLNESSES IS FAR FROM ADEQUATE WITH A SUBSTANTIAL PROPORTION OF THE PATIENTS BEING PHARMACORESISTANT AND SUFFERING FROM RELAPSES. ONE OF THE REASONS FOR THIS COMPLICATED SITUATION IS THAT WE DO NOT PRECISELY KNOW ABOUT THE CAUSES OF MENTAL DISORDERS, SO THEIR TREATMENT CANNOT BE CAUSAL. THE ETIOLOGY OF A MENTAL DISORDER IS TYPICALLY BASED ON A COMBINATION OF MOLECULAR (GENETIC) AND ENVIRONMENTAL FACTORS. AIM: THE AIM OF THE PROJECT IS TO DISCOVER THE GENE-ENVIRONMENT INTERACTIONS (GXE) IN A WIDE SPECTRUM OF MENTAL DISORDERS. METHODS: THE DESIGN OF OUR STUDY IS INNOVATIVE IN THE SENSE THAT WE INTEND TO STUDY LARGE GROUPS OF ASSOCIATED MENTAL DISORDERS AS A WHOLE INSTEAD OF IN ISOLATION. THIS WOULD ENABLE US TO MAP OUT THE POSSIBLE ENVIRONMENTAL CAUSAL FACTORS IN DETAIL IN RELATION TO THEIR CHARACTER, MAGNITUDE AND TIMING. THE PROJECT ALSO ALLOWS A STUDY OF GENETICS (INCLUDING EPIGENETICS AND MICROBIOMES) AS WELL AS THE ENVIRONMENT SIMULTANEOUSLY. WE PLAN ON INVOLVING THREE STUDY GROUPS: THE FIRST GROUP ARE PATIENTS SUFFERING FROM SCHIZOPHRENIA OR A MOOD DISORDER SUCH AS MAJOR DEPRESSION, RECURRENT DEPRESSIVE DISORDER AND BIPOLAR AFFECTIVE DISORDER; THE SECOND GROUP OF PATIENTS HAVE ANXIETY DISORDERS; AND THE THIRD GROUP ARE HEALTHY VOLUNTEERS FROM THE GENERAL POPULATION WHO ARE GENETICALLY UNRELATED. ALL OF THE STUDY SUBJECTS WILL UNDERGO THE FOLLOWING ASSESSMENTS: A PSYCHIATRIC EXAMINATION, THE IDENTIFICATION OF STRESSFUL LIFE EVENTS WITH THE AID OF A QUESTIONNAIRE, THE EXAMINATION OF THEIR REACTION TO STRESS, GENETIC AND EPIGENETIC (MICRORNA) ASSESSMENTS AND THE ANALYSIS OF ORAL AND GUT MICROBIOME. CONCLUSION: WE EXPECT THAT SOME OF THE GENETIC AS WELL AS ENVIRONMENTAL FACTORS IN THE STUDIED MENTAL DISORDERS ARE SHARED, WHILE SOME OTHERS ARE SPECIFIC. WE ALSO EXPECT THAT THE GXE (GENE-ENVIRONMENT INTERACTION) IN SCHIZOPHRENIC AND AFFECTIVE DISORDERS WILL BE DIFFERENT FROM THE GXE IN ANXIETY DISORDERS AND THAT THE GXE IN THE STUDIED MENTAL DISORDERS WILL DIFFER GENERALLY FROM THE GXE IN HEALTHY VOLUNTEERS. OUR RESULTS CAN HELP IN THE PREVENTION AND INDIVIDUALIZED TREATMENT OF A RANGE OF MENTAL DISORDERS. 2020 15 5637 42 SEROTONIN TRANSPORTER GENE POLYMORPHISMS IN SOUTHWESTERN IRANIAN PATIENTS WITH IRRITABLE BOWEL SYNDROME. BACKGROUND AND STUDY AIMS: IRRITABLE BOWEL SYNDROME IS A COMMON CHRONIC FUNCTIONAL GASTROINTESTINAL DISORDER OF UNKNOWN ETIOLOGY. SEROTONIN IS AN IMPORTANT FACTOR IN SENSORY SIGNALING IN THE BRAIN-GUT AXIS, WHICH PLAYS A KEY ROLE IN INTESTINAL MOTILITY AND SECRETION. SEROTONIN CLEARANCE IS MEDIATED BY A SPECIFIC PROTEIN CALLED THE SEROTONIN REUPTAKE TRANSPORTER. TRANSCRIPTION ACTIVITY OF THE SEROTONIN TRANSPORTER GENE IS AFFECTED BY SOME POLYMORPHISMS IN THIS GENE. THE AIM OF THIS STUDY WAS TO INVESTIGATE THE RELATIONSHIP BETWEEN SEROTONIN TRANSPORTER GENE POLYMORPHISMS AND IRRITABLE BOWEL SYNDROME. PATIENTS/MATERIAL AND METHODS: THE 5-HTTLPR, RS25531 AND STIN2VNTR POLYMORPHISMS OF THE SEROTONIN TRANSPORTER GENE WERE ANALYZED BY PCR-BASED METHODS IN 50 PATIENTS WITH IRRITABLE BOWEL SYNDROME AND 100 HEALTHY CONTROLS. RESULTS: SEROTONIN TRANSPORTER POLYMORPHISMS WERE SIMILAR IN PATIENTS AND HEALTHY CONTROLS. THERE WERE NO SIGNIFICANT DIFFERENCES IN ALLELE OR GENOTYPE FREQUENCIES BETWEEN THE TWO GROUPS. CONCLUSION: OUR FINDINGS SUGGEST THAT POLYMORPHISMS IN THE GENE ENCODING FOR THE SEROTONIN TRANSPORTER ARE NOT ASSOCIATED WITH IRRITABLE BOWEL SYNDROME. INTERACTIONS BETWEEN ENVIRONMENTAL FACTORS AND PREDISPOSING GENETIC FACTORS ARE IMPORTANT IN THE PATHOPHYSIOLOGY OF IRRITABLE BOWEL SYNDROME, AND FURTHER GENETIC AND EPIGENETIC RESEARCH MAY PROVIDE NOVEL INSIGHTS INTO THE MECHANISMS CONTRIBUTING TO THIS DISEASE. 2013 16 4514 32 MULTI-OMICS ANALYSIS REVEALS CHANGES IN THE INTESTINAL MICROBIOME, TRANSCRIPTOME, AND METHYLOME IN A RAT MODEL OF CHRONIC NON-BACTERIAL PROSTATITIS: INDICATIONS FOR THE EXISTENCE OF THE GUT-PROSTATE AXIS. CHRONIC NON-BACTERIAL PROSTATITIS (CNP) IS ONE OF THE MOST PREVALENT DISEASES IN HUMAN MALES WORLDWIDE. IN 2005, THE PROSTATE-GUT AXIS WAS FIRST PROPOSED TO INDICATE THE CLOSE RELATIONSHIP BETWEEN THE PROSTATE AND THE INTESTINE. THIS STUDY INVESTIGATED CNP-INDUCED CHANGES OF THE GUT MICROBIOTA, GENE EXPRESSION AND DNA METHYLATION IN A RAT MODEL BY USING MULTI-OMICS ANALYSIS. FIRSTLY, 16S RDNA SEQUENCING PRESENTED AN ALTERED STRUCTURE OF THE MICROBIOTA IN CECUM OF CNP RATS. THEN, TRANSCRIPTOMIC ANALYSIS REVEALED THAT THE EXPRESSION OF 185 GENES IN INTESTINAL EPITHELIUM WAS SIGNIFICANTLY CHANGED BY CNP. THESE CHANGES CAN PARTICIPATE IN THE IMMUNE SYSTEM, DIGESTIVE SYSTEM, METABOLIC PROCESS, ETC. FINALLY, METHYLC-CAPTURE SEQUENCING (MCC-SEQ) FOUND 73,232 DIFFERENTIALLY METHYLATED SITES (DMSS) IN THE DNA OF INTESTINAL EPITHELIUM BETWEEN CONTROL AND CNP RATS. A COMBINED ANALYSIS OF METHYLOMICS AND TRANSCRIPTOMICS SUGGESTED AN EPIGENETIC MECHANISM FOR CNP-INDUCED DIFFERENTIAL EXPRESSION GENES CORRELATED WITH INTESTINAL BARRIER FUNCTION, IMMUNITY, METABOLISM, ENTERIC INFECTIOUS DISEASE, ETC. MORE IMPORTANTLY, THE TRANSCRIPTOMIC, METHYLOMIC AND GUT MICROBIAL CHANGES WERE HIGHLY CORRELATED WITH MULTIPLE PROCESSES INCLUDING INTESTINAL IMMUNITY, METABOLISM AND EPITHELIAL BARRIER FUNCTION. IN THIS STUDY, DISRUPTED HOMEOSTASIS IN THE GUT MICROBIOTA, GENE EXPRESSION AND DNA METHYLATION WERE REPORTED IN CNP, WHICH SUPPORTS THE EXISTENCE OF THE GUT-PROSTATE AXIS. 2021 17 2091 32 EPIGENETIC DYSREGULATION OF VIRULENCE GENE EXPRESSION IN SEVERE PLASMODIUM FALCIPARUM MALARIA. CHRONIC INFECTIONS WITH THE HUMAN MALARIA PARASITE PLASMODIUM FALCIPARUM DEPEND ON ANTIGENIC VARIATION. P. FALCIPARUM ERYTHROCYTE MEMBRANE PROTEIN 1 (PFEMP1), THE MAJOR ERYTHROCYTE SURFACE ANTIGEN MEDIATING PARASITE SEQUESTRATION IN THE MICROVASCULATURE, IS ENCODED IN PARASITES BY A HIGHLY DIVERSE FAMILY OF VAR GENES. ANTIGENIC SWITCHING IS MEDIATED BY CLONAL VARIATION IN VAR EXPRESSION, AND RECENT IN VITRO STUDIES HAVE DEMONSTRATED A ROLE FOR EPIGENETIC PROCESSES IN VAR REGULATION. EXPRESSION OF PARTICULAR PFEMP1 VARIANTS MAY RESULT IN PARASITE ENRICHMENT IN DIFFERENT TISSUES, A FACTOR IN THE DEVELOPMENT OF SEVERE DISEASE. HERE, WE STUDY IN VIVO HUMAN INFECTIONS AND PROVIDE EVIDENCE THAT INFECTION-INDUCED STRESS RESPONSES IN THE HOST CAN MODIFY PFEMP1 EXPRESSION VIA THE PERTURBATION OF EPIGENETIC MECHANISMS. OUR WORK SUGGESTS THAT SEVERE DISEASE MAY NOT BE THE DIRECT RESULT OF AN ADAPTIVE VIRULENCE STRATEGY TO MAXIMIZE PARASITE SURVIVAL BUT THAT IT MAY INDICATE A LOSS OF CONTROL OF THE CAREFULLY REGULATED PROCESS OF ANTIGENIC SWITCHING THAT MAINTAINS CHRONIC INFECTIONS. 2012 18 1544 30 DNA METHYLATION IN HUMAN GASTRIC EPITHELIAL CELLS DEFINES REGIONAL IDENTITY WITHOUT RESTRICTING LINEAGE PLASTICITY. BACKGROUND: EPIGENETIC MODIFICATIONS IN MAMMALIAN DNA ARE COMMONLY MANIFESTED BY DNA METHYLATION. IN THE STOMACH, ALTERED DNA METHYLATION PATTERNS HAVE BEEN OBSERVED FOLLOWING CHRONIC HELICOBACTER PYLORI INFECTIONS AND IN GASTRIC CANCER. IN THE CONTEXT OF EPIGENETIC REGULATION, THE REGIONAL NATURE OF THE STOMACH HAS BEEN RARELY CONSIDERED IN DETAIL. RESULTS: HERE, WE ESTABLISH GASTRIC MUCOSA DERIVED PRIMARY CELL CULTURES AS A RELIABLE SOURCE OF NATIVE HUMAN EPITHELIUM. WE DESCRIBE THE DNA METHYLATION LANDSCAPE ACROSS THE PHENOTYPICALLY DIFFERENT REGIONS OF THE HEALTHY HUMAN STOMACH, I.E., ANTRUM, CORPUS, FUNDUS TOGETHER WITH THE CORRESPONDING TRANSCRIPTOMES. WE SHOW THAT STABLE REGIONAL DNA METHYLATION DIFFERENCES TRANSLATE TO A LIMITED EXTENT INTO REGULATION OF THE TRANSCRIPTOMIC PHENOTYPE, INDICATING A LARGELY PERMISSIVE EPIGENETIC REGULATION. WE IDENTIFY A SMALL NUMBER OF TRANSCRIPTION FACTORS WITH NOVEL REGION-SPECIFIC ACTIVITY AND LIKELY EPIGENETIC IMPACT IN THE STOMACH, INCLUDING GATA4, IRX5, IRX2, PDX1 AND CDX2. DETAILED ANALYSIS OF THE WNT PATHWAY REVEALS DIFFERENTIAL REGULATION ALONG THE CRANIOCAUDAL AXIS, WHICH INVOLVES NON-CANONICAL WNT SIGNALING IN DETERMINING CELL FATE IN THE PROXIMAL STOMACH. BY EXTENDING OUR ANALYSIS TO PRE-NEOPLASTIC LESIONS AND GASTRIC CANCERS, WE CONCLUDE THAT EPIGENETIC DYSREGULATION CHARACTERIZES INTESTINAL METAPLASIA AS A FOUNDING BASIS FOR FUNCTIONAL CHANGES IN GASTRIC CANCER. WE PRESENT INSIGHTS INTO THE DYNAMICS OF DNA METHYLATION ACROSS ANATOMICAL REGIONS OF THE HEALTHY STOMACH AND PATTERNS OF ITS CHANGE IN DISEASE. FINALLY, OUR STUDY PROVIDES A WELL-DEFINED RESOURCE OF REGIONAL STOMACH TRANSCRIPTION AND EPIGENETICS. 2022 19 2558 42 EPIGENETICS IN SUSCEPTIBILITY, PROGRESSION, AND DIAGNOSIS OF PERIODONTITIS. PERIODONTITIS IS CHARACTERIZED BY IRREVERSIBLE DESTRUCTION OF PERIODONTAL TISSUE. AT PRESENT, THE ACCEPTED ETIOLOGY OF PERIODONTITIS IS BASED ON A THREE-FACTOR THEORY INCLUDING PATHOGENIC BACTERIA, HOST FACTORS, AND ACQUIRED FACTORS. PERIODONTITIS DEVELOPMENT USUALLY TAKES A DECADE OR LONGER AND IS THEREFORE CALLED CHRONIC PERIODONTITIS (CP). TO SEARCH FOR GENETIC FACTORS ASSOCIATED WITH CP, SEVERAL GENOME-WIDE ASSOCIATION STUDY (GWAS) ANALYSES WERE CONDUCTED; HOWEVER, POLYMORPHISMS ASSOCIATED WITH CP HAVE NOT BEEN IDENTIFIED. EPIGENETICS, ON THE OTHER HAND, INVOLVES ACQUIRED TRANSCRIPTIONAL REGULATORY MECHANISMS DUE TO REVERSIBLY ALTERED CHROMATIN ACCESSIBILITY. EPIGENETIC STATUS IS A CONDITION SPECIFIC TO EACH TISSUE AND CELL, MOSTLY DETERMINED BY THE RESPONSES OF HOST CELLS TO STIMULATIONS BY LOCAL FACTORS, LIKE BACTERIAL INFLAMMATION, AND SYSTEMIC FACTORS SUCH AS NUTRITION STATUS, METABOLIC DISEASES, AND HEALTH CONDITIONS. SIGNIFICANTLY, EPIGENETIC STATUS HAS BEEN LINKED WITH THE ONSET AND PROGRESSION OF SEVERAL ACQUIRED DISEASES. THUS, EPIGENETIC FACTORS IN PERIODONTAL TISSUES ARE ATTRACTIVE TARGETS FOR PERIODONTITIS DIAGNOSIS AND TREATMENTS. IN THIS REVIEW, WE INTRODUCE ACCUMULATING EVIDENCE TO REVEAL THE EPIGENETIC BACKGROUND EFFECTS RELATED TO PERIODONTITIS CAUSED BY GENETIC FACTORS, SYSTEMIC DISEASES, AND LOCAL ENVIRONMENTAL FACTORS, SUCH AS SMOKING, AND CLARIFY THE UNDERLYING MECHANISMS BY WHICH EPIGENETIC ALTERATION INFLUENCES THE SUSCEPTIBILITY OF PERIODONTITIS. 2022 20 2011 35 EPIGENETIC BASIS OF MENTAL ILLNESS. PSYCHIATRIC DISORDERS ARE COMPLEX MULTIFACTORIAL ILLNESSES INVOLVING CHRONIC ALTERATIONS IN NEURAL CIRCUIT STRUCTURE AND FUNCTION AS WELL AS LIKELY ABNORMALITIES IN GLIAL CELLS. WHILE GENETIC FACTORS ARE IMPORTANT IN THE ETIOLOGY OF MOST MENTAL DISORDERS, THE RELATIVELY HIGH RATES OF DISCORDANCE AMONG IDENTICAL TWINS, PARTICULARLY FOR DEPRESSION AND OTHER STRESS-RELATED SYNDROMES, CLEARLY INDICATE THE IMPORTANCE OF ADDITIONAL MECHANISMS. ENVIRONMENTAL FACTORS SUCH AS STRESS ARE KNOWN TO PLAY A ROLE IN THE ONSET OF THESE ILLNESSES. EXPOSURE TO SUCH ENVIRONMENTAL INSULTS INDUCES STABLE CHANGES IN GENE EXPRESSION, NEURAL CIRCUIT FUNCTION, AND ULTIMATELY BEHAVIOR, AND THESE MALADAPTATIONS APPEAR DISTINCT BETWEEN DEVELOPMENTAL VERSUS ADULT EXPOSURES. INCREASING EVIDENCE INDICATES THAT THESE SUSTAINED ABNORMALITIES ARE MAINTAINED BY EPIGENETIC MODIFICATIONS IN SPECIFIC BRAIN REGIONS. INDEED, TRANSCRIPTIONAL DYSREGULATION AND THE ABERRANT EPIGENETIC REGULATION THAT UNDERLIES THIS DYSREGULATION IS A UNIFYING THEME IN PSYCHIATRIC DISORDERS. HERE, WE PROVIDE A PROGRESS REPORT OF EPIGENETIC STUDIES OF THE THREE MAJOR PSYCHIATRIC SYNDROMES, DEPRESSION, SCHIZOPHRENIA, AND BIPOLAR DISORDER. WE REVIEW THE LITERATURE DERIVED FROM ANIMAL MODELS OF THESE DISORDERS AS WELL AS FROM STUDIES OF POSTMORTEM BRAIN TISSUE FROM HUMAN PATIENTS. WHILE EPIGENETIC STUDIES OF MENTAL ILLNESS REMAIN AT EARLY STAGES, UNDERSTANDING HOW ENVIRONMENTAL FACTORS RECRUIT THE EPIGENETIC MACHINERY WITHIN SPECIFIC BRAIN REGIONS TO CAUSE LASTING CHANGES IN DISEASE SUSCEPTIBILITY AND PATHOPHYSIOLOGY IS REVEALING NEW INSIGHT INTO THE ETIOLOGY AND TREATMENT OF THESE CONDITIONS. 2016