1 3584 104 IMPACT OF SOCIAL DEFEAT STRESS ON DNA METHYLATION IN DRD2, NR3C1, AND STMN1 IN WILD-TYPE AND STMN1 KNOCK-OUT MICE. OBJECTIVE: EPIGENETIC PROFILES CAN BE MODIFIED BY STRESS. DOPAMINE RECEPTOR D2 (DRD2), GLUCOCORTICOID RECEPTOR GENE (NR3C1) AND STATHMIN 1 (STMN1) GENES ARE ALL IMPLICATED IN ADAPTATION TO STRESS. THE AIM OF STUDY IS TO INVESTIGATE IMPACT OF SOCIAL DEFEAT ON DNA METHYLATION IN DRD2, NR3C1, AND STMN1 IN WILD-TYPE (WT) AND STMN1 KNOCK-OUT (KO) MICE. METHODS: THE WT AND STMN1 KO MICE WERE SUBJECTED TO CHRONIC SOCIAL DEFEAT. BRAIN TISSUES OF THE PREFRONTAL CORTEX (PFC), AMYGDALA (AMY) AND HIPPOCAMPUS (HIP) WERE OBTAINED. WE MEASURED DNA METHYLATION LEVELS OF THE DRD2, NR3C1, AND STMN1 GENES IN THE PFC, AMY, AND HIP USING PYROSEQUENCING. RESULTS: IN WT MICE, SOCIAL DEFEAT STRESS DID NOT INDUCE ANY CHANGES IN DRD2 METHYLATION, WHEREAS SIGNIFICANT HYPERMETHYLATION OCCURRED IN NR3C1 AND STMN1 IN THE SUSCEPTIBLE AND UNSUSCEPTIBLE GROUPS, RESPECTIVELY, COMPARED TO THE CONTROL GROUP. THE METHYLATION RESPONSES IN THE STMN1 KO MICE DIFFERED FROM THOSE SEEN IN THE WT MICE, SUCH THAT HYPERMETHYLATION WAS EVIDENT IN ALL THREE GENES IN THE SUSCEPTIBLE AND UNSUSCEPTIBLE GROUPS COMPARED TO CONTROL GROUP. COMPARISON OF THE STMN1 KO AND WT MICE REVEALED THE SAME PATTERN OF HYPERMETHYLATION FOR ALL THREE GENES. CONCLUSION: SOCIAL DEFEAT STRESS INDUCED DIFFERENT EPIGENETIC MODIFICATIONS IN THREE GENES AMONG CONTROL, UNSUSCEPTIBLE, AND SUSCEPTIBLE GROUPS OF WT AND STMN1 KO MICE. IN PARTICULAR, HYPERMETHYLATION OF NR3C1 IN THE HIP OF THE SUSCEPTIBLE GROUP, AND OF STMN1 IN THE AMY OF THE UNSUSCEPTIBLE GROUP IN WT MICE, COULD SERVE AS EPIGENETIC BIOMARKERS OF STRESS SUSCEPTIBILITY AND STRESS RESILIENCE, RESPECTIVELY.	2022	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
2 3650  32 INCREASED TRANSCRIPTION OF TSPO, HDAC2, AND HDAC6 IN THE AMYGDALA OF MALES WITH ALCOHOL USE DISORDER. INTRODUCTION: REPEATED EXPOSURE TO HIGH DOSES OF ALCOHOL TRIGGERS NEUROINFLAMMATORY PROCESSES THAT CONTRIBUTE TO CRAVING AND MOOD DYSFUNCTION IN ALCOHOL USE DISORDER (AUD). THE UPREGULATION OF THE TRANSLOCATOR PROTEIN (TSPO) IS CONSIDERED A BIOMARKER OF NEUROINFLAMMATION, AND TSPO LIGANDS HAVE BEEN USED AS NEUROIMAGING BIOMARKERS OF NEUROINFLAMMATION. EPIGENETIC MECHANISMS ARE ALSO IMPLICATED IN NEUROINFLAMMATORY RESPONSES TO ALCOHOL, AND ELEVATED EXPRESSION OF HDAC2 AND HDAC6 HAS BEEN REPORTED IN THE BRAIN OF ANIMALS EXPOSED TO CHRONIC ALCOHOL. METHODS: THE PRESENT STUDY EXAMINED THE TRANSCRIPTIONAL REGULATION OF TSPO, HDAC2, AND HDAC6 IN HUMAN POSTMORTEM BRAIN TISSUE FROM MALES PREVIOUSLY DIAGNOSED WITH AUD (N = 11) COMPARED TO AGE-MATCHED NONDEPENDENT MALES (N = 13) IN FOUR BRAIN REGIONS RELEVANT TO AUD: PREFRONTAL CORTEX (PFC), NUCLEUS ACCUMBENS (NAC), HIPPOCAMPUS (HPP), AND AMYGDALA (AMY). RESULTS: TRANSLOCATOR PROTEIN MRNA LEVELS IN AMY AND PFC AND HDAC2 AND HDAC6 MRNA LEVELS IN AMY WERE UPREGULATED IN AUD COMPARED TO CONTROLS. IN AMY, TSPO MRNA LEVELS WERE POSITIVELY ASSOCIATED WITH HDAC2 AND HDAC6 MRNA LEVELS, SUGGESTING A POSSIBLE REGULATION OF TSPO BY HDAC2 AND HDAC6 IN THIS BRAIN REGION. IN CONTRAST, THERE WERE NO GROUP DIFFERENCES FOR TSPO, HDAC2, AND HDAC6 IN NAC AND HPP. CONCLUSION: OUR STUDY IS THE FIRST TO FIND UPREGULATED TSPO MRNA LEVELS IN AMY AND PFC IN POSTMORTEM BRAINS FROM AUD CONSISTENT WITH NEUROINFLAMMATION, AND IN THE AMYGDALA, THEY IMPLICATE EPIGENETIC REGULATION OF TSPO BY HDAC2 AND HDAC6.	2021	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
3 3080  43 GENOME-WIDE METHYLATION IN ALCOHOL USE DISORDER SUBJECTS: IMPLICATIONS FOR AN EPIGENETIC REGULATION OF THE CORTICO-LIMBIC GLUCOCORTICOID RECEPTORS (NR3C1). ENVIRONMENTAL FACTORS, INCLUDING SUBSTANCE ABUSE AND STRESS, CAUSE LONG-LASTING CHANGES IN THE REGULATION OF GENE EXPRESSION IN THE BRAIN VIA EPIGENETIC MECHANISMS, SUCH AS DNA METHYLATION. WE EXAMINED GENOME-WIDE DNA METHYLATION PATTERNS IN THE PREFRONTAL CORTEX (PFC, BA10) OF 25 PAIRS OF CONTROL AND INDIVIDUALS WITH ALCOHOL USE DISORDER (AUD), USING THE INFINIUM((R)) METHYLATIONEPIC BEADCHIP. WE IDENTIFIED 5254 DIFFERENTIALLY METHYLATED CPGS (P(NOMINAL) < 0.005). BIOINFORMATIC ANALYSES HIGHLIGHTED BIOLOGICAL PROCESSES CONTAINING GENES RELATED TO STRESS ADAPTATION, INCLUDING THE GLUCOCORTICOID RECEPTOR (ENCODED BY NR3C1). CONSIDERING THAT ALCOHOL IS A STRESSOR, WE FOCUSED OUR ATTENTION ON DIFFERENTIALLY METHYLATED REGIONS OF THE NR3C1 GENE AND VALIDATED THE DIFFERENTIAL METHYLATION OF SEVERAL GENES IN THE NR3C1 NETWORK. CHRONIC ALCOHOL DRINKING RESULTS IN A SIGNIFICANT INCREASED METHYLATION OF THE NR3C1 EXON VARIANT 1(H), WITH A PARTICULAR INCREASE IN THE LEVELS OF 5-HYDROXYMETHYLCYTOSINE OVER 5-METHYLCYTOSINE. THESE CHANGES IN DNA METHYLATION WERE ASSOCIATED WITH REDUCED NR3C1 MRNA AND PROTEIN EXPRESSION LEVELS IN PFC, AS WELL AS OTHER CORTICO-LIMBIC REGIONS OF AUD SUBJECTS WHEN COMPARED WITH CONTROLS. FURTHERMORE, WE SHOW THAT THE EXPRESSION OF SEVERAL STRESS-RESPONSIVE GENES (E.G., CRF, POMC, AND FKBP5) IS ALTERED IN THE PFC OF AUD SUBJECTS. THESE STRESS-RESPONSE GENES WERE ALSO CHANGED IN THE HIPPOCAMPUS, A REGION THAT IS HIGHLY SUSCEPTIBLE TO STRESS. THESE DATA SUGGEST THAT ALCOHOL-DEPENDENT ABERRANT DNA METHYLATION OF NR3C1 AND CONSEQUENT CHANGES IN OTHER STRESS-RELATED GENES MIGHT BE FUNDAMENTAL IN THE PATHOPHYSIOLOGY OF AUD AND LAY THE GROUNDWORK FOR TREATMENTS TARGETING THE EPIGENETIC MECHANISMS REGULATING NR3C1 IN AUD.	2021	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
4  989  32 CHRONIC SOCIAL DEFEAT STRESS DIFFERENTIALLY REGULATES THE EXPRESSION OF BDNF TRANSCRIPTS AND EPIGENETIC MODIFYING ENZYMES IN SUSCEPTIBLE AND RESILIENT MICE. OBJECTIVES: ALTHOUGH STRESS IS CONSIDERED A PRIMARY RISK FACTOR FOR NEUROPSYCHIATRIC DISORDERS, A MAJORITY OF INDIVIDUALS ARE RESILIENT TO THE EFFECTS OF STRESS EXPOSURE AND SUCCESSFULLY ADAPT TO ADVERSE LIFE EVENTS, WHILE OTHERS, THE SO-CALLED SUSCEPTIBLE INDIVIDUALS, MAY HAVE PROBLEMS TO PROPERLY ADAPT TO ENVIRONMENTAL CHANGES. HOWEVER, THE MECHANISMS UNDERLYING THESE DIFFERENT RESPONSES TO STRESS EXPOSURE ARE POORLY UNDERSTOOD.METHODS: ADULT MALE C57BL/6J MICE WERE EXPOSED TO CHRONIC SOCIAL DEFEAT STRESS PROTOCOL AND LEVELS OF BRAIN DERIVED NEUROTROPHIC FACTOR (BDNF) TRANSCRIPTS AND EPIGENETIC MODIFYING ENZYMES WERE ANALYSED BY REAL-TIME PCR IN THE HIPPOCAMPUS (HPC) AND PREFRONTAL CORTEX (PFC) OF SUSCEPTIBLE AND RESILIENT MICE.RESULTS: WE FOUND A SELECTIVE REDUCTION OF BDNF-6 TRANSCRIPT IN THE HPC AND AN INCREASE OF BDNF-4 TRANSCRIPT IN THE PFC OF SUSCEPTIBLE MICE. MOREOVER, SUSCEPTIBLE MICE SHOWED A SELECTIVE REDUCTION OF THE G9A MRNA LEVELS IN THE HPC, WHILE HDAC-5 AND DNMT3A MRNA LEVELS WERE SPECIFICALLY REDUCED IN THE PFC.CONCLUSIONS: OVERALL, OUR RESULTS, SHOWING A DIFFERENT EXPRESSION OF BDNF TRANSCRIPTS AND EPIGENETIC MODIFYING ENZYMES IN SUSCEPTIBLE AND RESILIENT MICE, SUGGEST THAT STRESS RESILIENCE IS NOT SIMPLY A LACK OF ACTIVATION OF STRESS-RELATED PATHWAYS, BUT IS RELATED TO THE ACTIVATION OF ADDITIONAL DIFFERENT SPECIFIC MECHANISMS.	2019	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
5 1328  33 DEPRESSION AND STRESS LEVELS INCREASE RISK OF LIVER CANCER THROUGH EPIGENETIC DOWNREGULATION OF HYPOCRETIN. RECENT STUDIES SUGGEST THAT HYPOCRETIN (HCRT, OREXIN) ARE INVOLVED IN STRESS REGULATION OF DEPRESSION THROUGH THE HYPOTHALAMIC-PITUITARY-ADRENAL (HPA) AXIS. HOWEVER, THE MOLECULAR MECHANISM BY WHICH HYPOCRETIN REGULATE NEUROBIOLOGICAL RESPONSES IS UNKNOWN. HEREIN, THE EFFECTS OF CHRONIC STRESS ON THE EPIGENETIC MODIFICATION OF HCRT AND ITS ASSOCIATION WITH DEPRESSION WERE EXPLORED WITH REGARD TO A POTENTIAL ROLE IN CANCER PROGRESSION. IN THE STUDY, SPRAGUE DAWLEY (SD) RATS WERE USED TO ESTABLISH AN ANIMAL MODEL OF CANCER WITH DEPRESSION BY ADMINISTRATING N-NITROSODIETHYLAMINE (DEN) AND CHRONIC UNPREDICTABLE MILD STRESS (CUMS). RNA-SEQUENCING WAS USED TO DETECT DIFFERENTIALLY EXPRESSED GENES IN THE HIPPOCAMPUS OF RATS AND QUANTITATIVE REAL-TIME POLYMERASE CHAIN REACTION (QRT-PCR) WAS USED TO VALIDATE THE RESULTS OF RNA-SEQUENCING. THE STATUS OF HCRT PROMOTER METHYLATION WAS ASSESSED BY METHYLATION SPECIFIC POLYMERASE CHAIN REACTION. BEHAVIORAL TESTS SHOWED THAT RATS EXPOSED TO CUMS HAD SIGNIFICANT DEPRESSIVE-LIKE BEHAVIORS. THE NUMBER OF LIVER TUMORS AND TUMOR LOAD IN DEPRESSED RATS EXPOSED TO CUMS WAS HIGHER THAN IN SD RATS WITHOUT CUMS. RNA-SEQUENCING REVEALED THAT HCRT WAS ONE OF THE MOST SIGINIFICANTLY DOWNREGULATED GENE IN THE HIPPOCAMPUS OF SD RATS WITH CUMS COMPARED TO NON-STRESSED GROUP, WHICH WAS VALIDATED BY QRT-PCR. HCRT MRNA EXPRESSION WAS DOWNREGULATED AND THE PROMOTER FOR HCRT WAS HYPER-METHYLATED IN THOSE WITH DEPRESSION. THESE RESULTS IDENTIFIED A CRITICAL ROLE FOR CHRONIC PSYCHOLOGICAL STRESSORS IN TUMORIGENESIS AND CANCER PROGRESSION, VIA EPIGENETIC HCRT DOWNREGULATION. SUCH EPIGENETIC DOWNREGULATION MAY BE THE MOLECULAR BASIS FOR THE ASSOCIATION OF CANCER WITH DEPRESSION.	2022	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
6 1820  35 EFFECTS OF CHRONIC RESTRAINT STRESS ON THE GLOBAL DNA METHYLATION PROFILE OF RAT LUNG CELLS: MODULATION BY PHYSICAL EXERCISE. THE POTENTIAL OF BEHAVIORAL STRESS TO AFFECT EPIGENETIC MECHANISMS OF NON-ENCEPHALIC TISSUES IS STILL UNDERESTIMATED. IN THE PRESENT STUDY WE EVALUATED THE EFFECTS OF CHRONIC BEHAVIORAL STRESS ON THE DNA METHYLATION PROFILE OF RAT LUNG CELLS. FURTHERMORE, WE EVALUATED THE POTENTIAL OF PHYSICAL EXERCISE TO MODULATE THE CHANGES EVOKED BY BEHAVIORAL STRESS IN LUNG CELLS. MALE WISTAR RATS WERE DIVIDED INTO FOUR EXPERIMENTAL GROUPS: (1) ANIMALS SUBMITTED TO CHRONIC RESTRAINT STRESS (CRS) (ST GROUP) DURING THE PERIOD OF THE 67TH-80TH POSTNATAL DAY (PND); (2) ANIMALS SUBMITTED TO PHYSICAL EXERCISE (EX GROUP) DURING THE 53RD-79TH PND; (3) ANIMALS SUBMITTED TO SWIMMING DURING THE 53RD-79TH PND AND TO CRS DURING THE 67TH-80TH PND (EX-ST GROUP); AND (4) ANIMALS NOT SUBMITTED TO STRESS OR SWIMMING PROTOCOLS (CTL). GLOBAL DNA METHYLATION WAS QUANTIFIED USING AN ELISA-BASED APPROACH AND GENE EXPRESSION WAS EVALUATED BY REAL TIME PCR. A DECREASED GLOBAL DNA METHYLATION PROFILE WAS OBSERVED IN THE ST GROUP, HOWEVER PHYSICAL EXERCISE DEMONSTRATED PROTECTION OF LUNG CELLS FROM THIS STRESS-RELATED HYPOMETHYLATION. INCREASED EXPRESSION OF THE DNMT1 GENE WAS EVIDENCED IN THE ST GROUP, WHEREAS PHYSICAL EXERCISE WAS SHOWN TO PROTECT LUNG CELLS FROM THIS STRESS-RELATED EFFECT IN THE EX-ST GROUP. COMPARATIVE ANALYSIS OF THE ST AND EX GROUPS REVEALED OPPOSITE EFFECTS ON THE EXPRESSION OF DNMT3A AND DNMT3B; HOWEVER, A STRESS-RELATED INCREASE IN EXPRESSION OF DNMT3A AND DNMT3B WAS NOT SEEN IN THE EX-ST GROUP. OUR DATA SHOWED THAT BEHAVIORAL STRESS INDUCED SIGNIFICANT CHANGES IN THE DNA METHYLATION PROFILE OF RAT LUNG CELLS AND THAT THIS COULD BE MODULATED BY PHYSICAL EXERCISE.	2017	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
7 5273  30 PROMOTER METHYLATION AND BDNF AND DAT1 GENE EXPRESSION PROFILES IN PATIENTS WITH DRUG ADDICTION. BACKGROUND: DRUG ADDICTION IS A BRAIN DISORDER THAT HAS NEGATIVE CONSEQUENCES FOR INDIVIDUALS AND SOCIETY. ADDICTIONS ARE CHRONIC RELAPSING DISEASES OF THE BRAIN THAT ARE CAUSED BY DIRECT DRUG-INDUCED EFFECTS AND PERSEVERING NEUROADAPTATIONS AT THE EPIGENETIC, NEUROPEPTIDE AND NEUROTRANSMITTER LEVELS. BECAUSE THE DOPAMINERGIC SYSTEM HAS A SIGNIFICANT ROLE IN DRUG ABUSE, THE PURPOSE OF THIS STUDY WAS TO ANALYZE THE METHYLATION AND EXPRESSION PROFILE OF BRAIN-DERIVED NEUROTROPHIC FACTOR (BDNF) AND DOPAMINE TRANSPORTER (DAT1) GENES IN INDIVIDUALS WITH DRUG ADDICTION. MATERIALS AND METHODS: BDNF AND DAT1 PROMOTER METHYLATION WERE INVESTIGATED WITH A METHYLATION-SPECIFIC POLYMERASE CHAIN REACTION (PCR) TECHNIQUE IN BLOOD SAMPLES FROM 75 INDIVIDUALS WITH DRUG ADDICTION AND 65 HEALTHY CONTROLS. THE EXPRESSION LEVELS OF BDNF AND DAT1 WERE ASSESSED IN 12 MRNA SAMPLES FROM THE BLOOD OF PATIENTS AND COMPARED TO THE SAMPLES OF HEALTHY CONTROLS (N = 12) WITH REAL-TIME QUANTITATIVE REVERSE TRANSCRIPTION PCR. RESULTS: NO SIGNIFICANT DIFFERENCES WERE FOUND IN THE METHYLATION OF BDNF AND DAT1 BETWEEN PATIENTS AND CONTROLS, BUT THE RELATIVE LEVELS OF EXPRESSION OF BDNF AND DAT1 MRNA DIFFERED SIGNIFICANTLY IN THE PATIENTS COMPARED TO CONTROLS (P < 0.0001). CONCLUSION: THESE RESULTS SHOWED THAT THE METHYLATION STATUS OF THE BDNF AND DAT1 GENES HAD NO SIGNIFICANT FUNCTION IN THE PROCESSES OF DRUG ADDICTION.	2015	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
8 1671  29 DRD2 METHYLATION IS ASSOCIATED WITH EXECUTIVE CONTROL NETWORK CONNECTIVITY AND SEVERITY OF ALCOHOL PROBLEMS AMONG A SAMPLE OF POLYSUBSTANCE USERS. CHRONIC EXPOSURE TO ALCOHOL AND OTHER DRUGS OF ABUSE HAS BEEN ASSOCIATED WITH DELETERIOUS CONSEQUENCES, INCLUDING FUNCTIONAL CONNECTIVITY DEFICITS WITHIN NEURAL NETWORKS ASSOCIATED WITH EXECUTIVE CONTROL. ALTERED FUNCTIONAL CONNECTIVITY WITHIN THE EXECUTIVE CONTROL NETWORK (ECN) MIGHT UNDERLIE THE PROGRESSIVE INABILITY TO CONTROL CONSUMPTION OF ALCOHOL AND OTHER DRUGS AS SUBSTANCE USE DISORDERS PROGRESS. GENETIC AND EPIGENETIC FACTORS HAVE BEEN ASSOCIATED WITH SUBSTANCE USE DISORDERS (SUDS). FOR EXAMPLE, DOPAMINE RECEPTOR 2 (DRD2) FUNCTIONING HAS BEEN ASSOCIATED WITH ALCOHOL USE DISORDER (AUD) AND RELATED PHENOTYPES, INCLUDING CORRELATES OF EXECUTIVE FUNCTIONING. THE PRESENT STUDY AIMS TO EXPLORE THE RELATIONSHIP BETWEEN A CONTINUOUS MEASURE OF ALCOHOL-RELATED PROBLEMS, EPIGENETIC MARKERS (METHYLATION) WITHIN THE DRD2 GENE, AND FUNCTIONAL CONNECTIVITY WITHIN THE ECN AMONG A SAMPLE OF POLYSUBSTANCE USERS. A COMMUNITY SAMPLE OF 658 SUBJECTS, WHOSE CONSUMPTION OF ALCOHOL, NICOTINE, AND CANNABIS SPAN ACROSS A SPECTRUM OF QUANTITY AND FREQUENCY OF USE, WERE OBTAINED ACROSS PREVIOUS STUDIES IN POLYSUBSTANCE USING POPULATIONS. RESTING STATE FUNCTIONAL MAGNETIC RESONANCE IMAGING WAS ANALYZED TO IDENTIFY INTRINSIC CONNECTIVITY NETWORKS USING A PRIORI REGIONS OF INTEREST. METHYLATION MEASUREMENT OF FUNCTIONALLY RELEVANT SITES WITHIN THE DRD2 GENE WAS ACHIEVED VIA PYROSEQUENCING. REGRESSION-BASED MODELS, INCLUDING MEDIATION AND MODERATION MODELS, TESTED THE ASSOCIATION BETWEEN DRD2 METHYLATION, FUNCTIONAL CONNECTIVITY WITHIN INTRINSIC NEURAL NETWORKS (INCLUDING THE ECN), AND SEVERITY OF ALCOHOL PROBLEMS. RESULTS SUGGEST THAT AVERAGE DRD2 METHYLATION WAS NEGATIVELY ASSOCIATED WITH RIGHT ECN (RECN) AND LEFT ECN (LECN) CONNECTIVITY, BUT NOT ASSOCIATED WITH OTHER NETWORKS TESTED, AND DRD2 METHYLATION WAS SIGNIFICANTLY ASSOCIATED WITH ALCOHOL PROBLEMS SEVERITY. MEDIATION MODELS WERE NOT SUPPORTED, ALTHOUGH MODERATION MODELS SUGGESTED THAT CONNECTIVITY BETWEEN EDGES WITHIN THE RECN MODERATED THE RELATIONSHIP BETWEEN DRD2 METHYLATION AND AUD SEVERITY. RESULTS SUPPORT A THEORETICAL MODEL IN WHICH EPIGENETIC FACTORS ARE ASSOCIATED WITH NEUROBIOLOGICAL CORRELATES OF ALCOHOL CONSUMPTION AMONG A SAMPLE OF POLYSUBSTANCE USERS.	2020	
                                                                                                                                                                                                                                                                                                                      
9  433  28 ANTIDEPRESSANT TREATMENT IS ASSOCIATED WITH EPIGENETIC ALTERATIONS OF HOMER1 PROMOTER IN A MOUSE MODEL OF CHRONIC DEPRESSION. BACKGROUND: UNDERSTANDING THE NEUROBIOLOGY OF DEPRESSION AND THE MECHANISM OF ACTION OF THERAPEUTIC MEASURES IS CURRENTLY A RESEARCH PRIORITY. WE HAVE SHOWN THAT THE EXPRESSION OF THE SYNAPTIC PROTEIN HOMER1A CORRELATES WITH DEPRESSION-LIKE BEHAVIOR AND ITS INDUCTION IS A COMMON MECHANISM OF ACTION OF DIFFERENT ANTIDEPRESSANT TREATMENTS. HOWEVER, THE MECHANISM OF HOMER1A REGULATION IS STILL UNKNOWN. METHODS: WE COMBINED THE CHRONIC DESPAIR MOUSE MODEL (CDM) OF CHRONIC DEPRESSION WITH DIFFERENT ANTIDEPRESSANT TREATMENTS. DEPRESSION-LIKE BEHAVIOR WAS CHARACTERIZED BY FORCED SWIM AND TAIL SUSPENSION TESTS, AND VIA AUTOMATIC MEASUREMENT OF SUCROSE PREFERENCE IN INTELLICAGE. THE HOMER1 MRNA EXPRESSION AND PROMOTER DNA METHYLATION WERE ANALYZED IN CORTEX AND PERIPHERAL BLOOD BY QRT-PCR AND PYROSEQUENCING. RESULTS: CDM MICE SHOW DECREASED HOMER1A AND HOMER1B/C MRNA EXPRESSION IN CORTEX AND BLOOD SAMPLES, WHILE CHRONIC TREATMENT WITH IMIPRAMINE AND FLUOXETINE OR ACUTE KETAMINE APPLICATION INCREASES THEIR LEVEL ONLY IN THE CORTEX. THE QUANTITATIVE ANALYSES OF THE METHYLATION OF 7 CPG SITES, LOCATED ON THE HOMER1 PROMOTER REGION CONTAINING SEVERAL CRE BINDING SITES, SHOW A SIGNIFICANT INCREASE IN DNA METHYLATION IN THE CORTEX OF CDM MICE. IN CONTRAST, ANTIDEPRESSANT TREATMENTS REDUCE THE METHYLATION LEVEL. LIMITATIONS: HOMER1 EXPRESSION AND PROMOTOR METHYLATION WERE NOT ANALYZED IN DIFFERENT BLOOD CELL TYPES. OTHER CPG SITES OF HOMER1 PROMOTER SHOULD BE INVESTIGATED IN FUTURE STUDIES. OUR EXPERIMENTAL APPROACH DOES NOT DISTINGUISH BETWEEN METHYLATION AND HYDROXYMETHYLATION. CONCLUSIONS: WE DEMONSTRATE THAT STRESS-INDUCED DEPRESSION-LIKE BEHAVIOR AND ANTIDEPRESSANT TREATMENTS ARE ASSOCIATED WITH EPIGENETIC ALTERATIONS OF HOMER1 PROMOTER, PROVIDING NEW INSIGHTS INTO THE MECHANISM OF ANTIDEPRESSANT TREATMENT.	2021	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
10 1418  37 DIFFERENCES IN DNA METHYLATION REPROGRAMMING UNDERLIE THE SEXUAL DIMORPHISM OF BEHAVIORAL DISORDER CAUSED BY PRENATAL STRESS IN RATS. PRENATAL STRESS (PS) CAN LEAD TO NEUROENDOCRINE AND EMOTIONAL DISORDERS LATER IN ADOLESCENCE. SEXUAL DIMORPHISM IN THESE NEURODEVELOPMENTAL OUTCOMES HAVE BEEN OBSERVED; HOWEVER, THE UNDERLYING MECHANISMS ARE NOT FULLY UNDERSTOOD. TO ADDRESS THIS ISSUE, WE INVESTIGATED WHETHER THERE ARE SEX DIFFERENCES IN EPIGENETIC REPROGRAMMING IN RATS EXPOSED TO PS. PREGNANT FEMALE RATS WERE SUBJECTED TO CHRONIC RESTRAINT STRESS FROM GESTATIONAL DAY (G)12 TO G18. FROM POSTNATAL DAY (P)38 TO P45, SUBGROUPS OF OFFSPRING INCLUDING BOTH MALES AND FEMALES WERE SUBJECTED TO BEHAVIORAL TESTING AND BRAIN TISSUE SPECIMENS WERE ANALYZED BY DNA PYROSEQUENCING, WESTERN BLOTTING, AND GOLGI STAINING TO ASSESS CHANGES IN METHYLATION PATTERN OF GLUCOCORTICOID RECEPTOR (GR) GENE, EXPRESSION OF DNA METHYLTRANSFERASE (DNMT) AND DNA DEMETHYLASE, AND DENDRITE MORPHOLOGY, RESPECTIVELY. THE DNA METHYLTRANSFERASE INHIBITOR DECITABINE WAS ADMINISTERED TO RATS PRIOR TO PS TO FURTHER EVALUATE THE ROLE OF METHYLATION IN THE SEXUALLY DIMORPHIC EFFECTS OF PS. THE RESULTS SHOWED THAT PS INCREASED ANXIETY-LIKE BEHAVIOR IN OFFSPRING, ESPECIALLY IN FEMALES, WHILE DEPRESSION-LIKE BEHAVIOR WAS INCREASED IN MALE OFFSPRING COMPARED TO CONTROL LITTERMATES. THE METHYLATION PATTERN IN THE PROMOTER REGION OF THE GR GENE DIFFERED BETWEEN MALES AND FEMALES. SEX-SPECIFIC CHANGES IN THE EXPRESSION OF DNMTS (DNMT1 AND DNMT3A) AND DNA DEMETHYLASE (TET METHYLCYTOSINE DIOXYGENASE 2) WERE ALSO OBSERVED. INTERESTINGLY, DECITABINE ALLEVIATED THE BEHAVIORAL DISORDER CAUSED BY PS AND RESTORED DENDRITE DENSITY AND MORPHOLOGY IN FEMALE BUT NOT MALE RATS. THESE FINDINGS SUGGEST THAT DIFFERENT CHANGE PATTERNS OF DNMT AND DEMETHYLASE IN THE TWO SEXES AFTER PS ARE RESPONSIBLE FOR THE SEXUALLY DIMORPHISM, WHICH COULD HAVE IMPLICATIONS FOR THE CLINICAL MANAGEMENT OF STRESS-RELATED DISORDERS.	2020	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
11 5205  34 PRENATAL STRESS CHANGES THE GLYCOPROTEIN GPM6A GENE EXPRESSION AND INDUCES EPIGENETIC CHANGES IN RAT OFFSPRING BRAIN. PRENATAL STRESS (PS) EXERTS STRONG IMPACT ON FETAL BRAIN DEVELOPMENT AND ON ADULT OFFSPRING BRAIN FUNCTIONS. PREVIOUS WORK DEMONSTRATED THAT CHRONIC STRESS ALTERS THE MRNA EXPRESSION OF GPM6A, A NEURONAL GLYCOPROTEIN INVOLVED IN FILOPODIUM EXTENSION. IN THIS WORK, WE ANALYZED THE EFFECT OF PS ON GPM6A EXPRESSION AND THE EPIGENETIC MECHANISMS INVOLVED. PREGNANT WISTAR RATS RECEIVED RESTRAINT STRESS DURING THE LAST WEEK OF GESTATION. MALE OFFSPRING WERE SACRIFICED ON POSTNATAL DAYS 28 AND 60. HIPPOCAMPUS AND PREFRONTAL CORTEX SAMPLES WERE ANALYZED FOR GENE EXPRESSION (QPCR FOR MRNAS AND MICRORNAS), METHYLATION STATUS (BISULFITE CONVERSION) AND PROTEIN LEVELS. HIPPOCAMPAL NEURONS IN CULTURE WERE USED TO ANALYZE MICRORNA OVEREXPRESSION EFFECTS. PRENATAL STRESS INDUCED CHANGES IN GPM6A LEVELS IN BOTH TISSUES AND AT BOTH AGES ANALYZED, INDICATING A PERSISTENT EFFECT. TWO CPG ISLANDS IN THE GPM6A GENE WERE IDENTIFIED. VARIATIONS IN THE METHYLATION PATTERN AT THREE SPECIFIC CPGS WERE FOUND IN HIPPOCAMPUS, BUT NOT IN PFC SAMPLES FROM PS OFFSPRING. MICRORNAS PREDICTED TO TARGET GPM6A WERE IDENTIFIED IN SILICO. QPCR MEASUREMENTS SHOWED THAT PS MODIFIED THE EXPRESSION OF SEVERAL MICRORNAS IN BOTH TISSUES, BEING MICRORNA-133B THE MOST SIGNIFICANTLY ALTERED. FURTHER STUDIES OVEREXPRESSING THIS MICRORNA IN NEURONAL CULTURES SHOWED A REDUCTION IN GMP6A MRNA AND PROTEIN LEVEL. MOREOVER FILOPODIUM DENSITY WAS ALSO REDUCED, SUGGESTING THAT GPM6A FUNCTION WAS AFFECTED. GESTATIONAL STRESS AFFECTED GPM6A GENE EXPRESSION IN OFFSPRING LIKELY THROUGH CHANGES IN METHYLATION STATUS AND IN POSTTRANSCRIPTIONAL REGULATION BY MICRORNAS. THUS, OUR FINDINGS PROPOSE GPM6A AS A NOVEL TARGET FOR EPIGENETIC REGULATION DURING PRENATAL STRESS.	2014	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
12 6804  36 [EPIGENETIC REGULATION IN DEPRESSION]. RECENT RESEARCH HAS RAISED THE NOTION THAT EPIGENETIC MECHANISMS (E.G., DNA METHYLATION AND HISTONE MODIFICATIONS), WHICH EXERT LASTING CONTROL OVER GENE EXPRESSION WITHOUT ALTERING THE GENETIC CODE, COULD MEDIATE STABLE CHANGES IN BRAIN FUNCTION. HOWEVER, THE ROLE OF ENVIRONMENTAL FACTORS ALONG WITH GENETIC FACTORS IN THE EPIGENETIC REGULATION OF THE PATHOGENESIS OF DEPRESSION IS LARGELY UNKNOWN. TWO GENETICALLY DISTINCT MICE STRAINS, BALB/C (BALB) AND C57BL/6 (B6), EXHIBIT DIFFERENT BEHAVIORAL RESPONSES TO CHRONIC STRESS. WITH CHRONIC STRESS, BALB MICE SHOWED DEPRESSIVE-LIKE BEHAVIORS, BUT NOT B6 MICE, AND GLIAL CELL-DERIVED NEUROTROPHIC FACTOR (GDNF) EXPRESSION LEVEL WAS DECREASED IN THE VENTRAL STRIATUM OF BALB MICE BUT INCREASED IN B6 MICE. IN BALB MICE, DEPRESSIVE-LIKE BEHAVIORS AND DECREASED GDNF EXPRESSION WERE RECOVERED BY CHRONIC ANTIDEPRESSANT TREATMENT. THEREFORE, WE USED THESE TWO MICE STRAINS TO INVESTIGATE HOW THE EPIGENETIC STATUS OF THE GDNF GENE IN THE VENTRAL STRIATUM MODULATES STRESS VULNERABILITY. BOTH MICE STRAINS SHOWED INCREASED DNA METHYLATION LEVELS AND MECP2 RECRUITMENT IN THE GDNF PROMOTER REGION. HOWEVER, HISTONE H3 ACETYLATION LEVEL WAS DECREASED IN BALB MICE, BUT INCREASED IN B6 MICE. FURTHERMORE, BALB MICE SHOWED INCREASED HISTONE DEACETYLASE2 (HDAC2) EXPRESSION LEVEL AND RE-CHIP ASSAY REVEALED HDAC2-MECP2 COMPLEX IN BALB MICE. OUR RESULTS INDICATE THE CRUCIAL ROLE OF HISTONE MODIFICATION BY HDAC2 AND MECP2 COMPLEX FOR THE CONTROL OF GDNF EXPRESSION AND SUBSEQUENT BEHAVIORAL RESPONSES TO CHRONIC STRESS, IN OTHER WORDS, THE SUSCEPTIBILITY TO STRESS. IN ADDITION, WE INVESTIGATED THE EFFECT OF ANTIDEPRESSANTS ON THE EPIGENETIC REGULATION OF GDNF EXPRESSION. WE FOUND A REDUCED LEVEL OF HDAC4 RECRUITMENT AT THE GDNF PROMOTER REGION WITH ANTIDEPRESSANTS. THUS, OUR DATA SUGGEST THAT ANTIDEPRESSANTS INCREASE TRANSCRIPTIONAL ACTIVITY OF THE GDNF GENE THROUGH THE MODULATION OF HISTONE ACETYLATION BY HDAC4. FINALLY, WE EXAMINED THE EXPRESSIONS OF GDNF AND EPIGENETIC-RELATED MOLECULES MRNAS WITH MAJOR DEPRESSIVE AND BIPOLAR DISORDER PATIENTS BY USING QUANTITATIVE REAL-TIME PCR. WE FOUND THE ABERRANT EXPRESSION OF GDNF AND EPIGENETIC-RELATED GENES INCLUDING HDAC2 AND HDAC4 IN MOOD DISORDER PATIENTS. THUS, OUR DATA PROVIDE NOVEL INSIGHTS SUGGESTING THAT EPIGENETIC MECHANISMS OF GDNF EXPRESSION ARE INVOLVED IN THE PATHOGENESIS OR PATHOPHYSIOLOGY OF DEPRESSION.	2012	
                                                                                                                                                                                                                                                
13 2319  32 EPIGENETIC REGULATION OF GABAERGIC NEUROTRANSMISSION AND NEUROSTEROID BIOSYNTHESIS IN ALCOHOL USE DISORDER. BACKGROUND: ALCOHOL USE DISORDER (AUD) IS A CHRONIC RELAPSING BRAIN DISORDER. GABAA RECEPTOR (GABAAR) SUBUNITS ARE A TARGET FOR THE PHARMACOLOGICAL EFFECTS OF ALCOHOL. NEUROSTEROIDS PLAY AN IMPORTANT ROLE IN THE FINE-TUNING OF GABAAR FUNCTION IN THE BRAIN. RECENTLY, WE HAVE SHOWN THAT AUD IS ASSOCIATED WITH CHANGES IN DNA METHYLATION MECHANISMS. HOWEVER, THE ROLE OF DNA METHYLATION IN THE REGULATION OF NEUROSTEROID BIOSYNTHESIS AND GABAERGIC NEUROTRANSMISSION IN AUD PATIENTS REMAINS UNDER-INVESTIGATED. METHODS: IN A COHORT OF POSTMORTEM BRAINS FROM 20 MALE CONTROLS AND AUD PATIENTS, WE INVESTIGATED THE EXPRESSION OF GABAAR SUBUNITS AND NEUROSTEROID BIOSYNTHETIC ENZYMES AND THEIR REGULATION BY DNA METHYLATION MECHANISMS. NEUROSTEROID LEVELS WERE QUANTIFIED BY GAS CHROMATOGRAPHY-MASS SPECTROMETRY. RESULTS: THE ALPHA 2 SUBUNIT EXPRESSION WAS REDUCED DUE TO INCREASED DNA METHYLATION AT THE GENE PROMOTER REGION IN THE CEREBELLUM OF AUD PATIENTS, A BRAIN AREA PARTICULARLY SENSITIVE TO THE EFFECTS OF ALCOHOL. ALCOHOL-INDUCED ALTERATION IN GABAAR SUBUNITS WAS ALSO OBSERVED IN THE PREFRONTAL CORTEX. NEUROSTEROID BIOSYNTHESIS WAS ALSO AFFECTED WITH REDUCED CEREBELLAR EXPRESSION OF THE 18KDA TRANSLOCATOR PROTEIN AND 3ALPHA-HYDROXYSTEROID DEHYDROGENASE MRNAS. NOTABLY, INCREASED DNA METHYLATION LEVELS WERE OBSERVED AT THE PROMOTER REGION OF 3ALPHA-HYDROXYSTEROID DEHYDROGENASE. THESE CHANGES WERE ASSOCIATED WITH MARKEDLY REDUCED LEVELS OF ALLOPREGNANOLONE AND PREGNANOLONE IN THE CEREBELLUM. CONCLUSION: GIVEN THE KEY ROLE OF NEUROSTEROIDS IN MODULATING THE STRENGTH OF GABAAR-MEDIATED INHIBITION, OUR DATA SUGGEST THAT ALCOHOL-INDUCED IMPAIRMENTS IN GABAERGIC NEUROTRANSMISSION MIGHT BE PROFOUNDLY IMPACTED BY REDUCED NEUROSTEROID BIOSYNTHESIS MOST LIKELY VIA DNA HYPERMETHYLATION.	2021	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
14 2152  36 EPIGENETIC MECHANISM OF 5-HT/NE/DA TRIPLE REUPTAKE INHIBITOR ON ADULT DEPRESSION SUSCEPTIBILITY IN EARLY STRESS MICE. MAJOR DEPRESSIVE DISORDER (MDD) IS A CHRONIC, REMITTING AND DEBILITATING DISEASE AND THE ETIOLOGY OF MDD IS HIGHLY COMPLICATED THAT INVOLVES GENETIC AND ENVIRONMENTAL INTERACTIONS. DESPITE MANY PHARMACOTHERAPEUTIC OPTIONS, MANY PATIENTS REMAIN POORLY TREATED AND THE DEVELOPMENT OF EFFECTIVE TREATMENTS REMAINS A HIGH PRIORITY IN THE FIELD. LPM570065 IS A POTENT 5-HYDROXYTRYPTAMINE (5-HT), NOREPINEPHRINE (NE) AND DOPAMINE (DA) TRIPLE REUPTAKE INHIBITOR AND BOTH PRECLINICAL AND CLINICAL RESULTS DEMONSTRATE SIGNIFICANT EFFICACY AGAINST MDD. THIS STUDY EXTENDS PREVIOUS FINDINGS TO EXAMINE THE EFFECTS AND UNDERLYING MECHANISMS OF LPM570065 ON STRESS VULNERABILITY USING A "TWO-HIT" STRESS MOUSE MODEL. THE "TWO-HIT" STRESS MODEL USED ADULT MICE THAT HAD EXPERIENCED EARLY LIFE MATERNAL SEPARATION (MS) STRESS FOR SOCIAL DEFEAT STRESS (SDS) AND THEN THEY WERE EVALUATED IN THREE BEHAVIORAL ASSAYS: SUCROSE PREFERENCE TEST, TAIL SUSPENSION TEST AND FORCED SWIMMING TEST. FOR THE MECHANISTIC STUDIES, METHYLATION-SPECIFIC DIFFERENTIALLY EXPRESSED GENES IN MOUSE HIPPOCAMPAL TISSUE AND VENTRAL TEGMENTAL AREA (VTA) WERE ANALYZED BY WHOLE-GENOME TRANSCRIPTOME ANALYSIS ALONG WITH NEXT-GENERATION BISULFITE SEQUENCING ANALYSIS, FOLLOWED BY RT-PCR AND PYROPHOSPHATE SEQUENCING TO CONFIRM GENE EXPRESSION AND METHYLATION. LPM570065 SIGNIFICANTLY REVERSED DEPRESSIVE-LIKE BEHAVIORS IN THE MICE IN THE SUCROSE PREFERENCE TEST, THE TAIL SUSPENSION TEST, AND THE FORCED SWIMMING TEST. MORPHOLOGICALLY, LPM570065 INCREASED THE DENSITY OF DENDRITIC SPINES IN HIPPOCAMPAL CA1 NEURONS. HYPERMETHYLATION AND DOWNREGULATION OF OXYTOCIN RECEPTOR (OXTR) IN THE HIPPOCAMPAL TISSUES ALONG WITH INCREASED PROTEIN EXPRESSION OF DNMT1 AND DNMT3A IN MICE THAT EXPERIENCED THE "TWO-HIT" STRESS COMPARED TO THOSE THAT ONLY EXPERIENCED ADULTHOOD SOCIAL DEFEAT STRESS, AND LPM570065 COULD REVERSE THESE CHANGES. COMBINED, THESE RESULTS SUGGEST THAT METHYLATION SPECIFICITY OF THE GENE OXTR IN THE HIPPOCAMPUS MAY PLAY AN IMPORTANT ROLE IN EARLY LIFE STRESS-INDUCED SUSCEPTIBILITY TO DEPRESSION AND THAT THE5-HT/NE/DA TRIPLE REUPTAKE INHIBITOR LPM570065 MAY REDUCE DEPRESSION SUSCEPTIBILITY VIA THE REVERSAL OF THE METHYLATION OF THE GENE OXTR.	2022	
                                                                                                                                                                                                                                                                                                                                                                             
15 1197  40 CORTICOSTERONE INDUCES DISCRETE EPIGENETIC SIGNATURES IN THE DORSAL AND VENTRAL HIPPOCAMPUS THAT DEPEND UPON SEX AND GENOTYPE: FOCUS ON METHYLATED NR3C1 GENE. THE GENOMIC EFFECTS OF CIRCULATING GLUCOCORTICOIDS ARE PARTICULARLY RELEVANT IN CORTICO-LIMBIC STRUCTURES, WHICH EXPRESS A HIGH CONCENTRATION OF STEROID HORMONE RECEPTORS. TO DATE, NO STUDIES HAVE INVESTIGATED GENOMIC DIFFERENCES IN HIPPOCAMPAL SUBREGIONS, NAMELY THE DORSAL (DHPC) AND VENTRAL (VHPC) HIPPOCAMPUS, IN PRECLINICAL MODELS TREATED WITH EXOGENOUS GLUCOCORTICOIDS. CHRONIC ORAL CORTICOSTERONE (CORT) IN MOUSE IS A PHARMACOLOGICAL APPROACH THAT DISRUPTS THE ACTIVITY OF THE HYPOTHALAMIC-PITUITARY-ADRENAL AXIS, INCREASES AFFECTIVE BEHAVIOR, AND INDUCES GENOMIC CHANGES AFTER STRESS IN THE HPC OF WILDTYPE (WT) MICE AND MICE HETEROZYGOUS FOR THE GENE CODING FOR BRAIN-DERIVED NEUROTROPHIC FACTOR VAL66MET (HMET), A VARIANT ASSOCIATED WITH GENETIC SUSCEPTIBILITY TO STRESS. USING RNA-SEQUENCING, WE INVESTIGATED THE GENOMIC SIGNATURES OF ORAL CORT IN THE DHPC AND VHPC OF WT AND HMET MALE AND FEMALE MICE, AND EXAMINED SEX AND GENOTYPE DIFFERENCES IN RESPONSE TO ORAL CORT. MALES UNDER CORT SHOWED LOWER GLYCEMIA AND INCREASED ANXIETY- AND DEPRESSION-LIKE BEHAVIOR COMPARED TO FEMALES THAT SHOWED INSTEAD OPPOSITE AFFECTIVE BEHAVIOR IN RESPONSE TO CORT. RANK-RANK-HYPERGEOMETRIC OVERLAP (RRHO) WAS USED TO IDENTIFY GENES FROM A CONTINUOUS GRADIENT OF SIGNIFICANCY THAT WERE CONCORDANT ACROSS GROUPS. RRHO SHOWED THAT CORT-INDUCED DIFFERENTIALLY EXPRESSED GENES (DEGS) IN WT MICE AND HMET MICE CONVERGED IN THE DHPC OF MALES AND FEMALES, WHILE IN THE VHPC, DEGS CONVERGED IN MALES AND DIVERGED IN FEMALES. THE VHPC SHOWED A HIGHER NUMBER OF DEGS COMPARED TO THE DHPC AND EXHIBITED SEX DIFFERENCES RELATED TO GLUCOCORTICOID RECEPTOR (GR)-BINDING GENES AND EPIGENETIC MODIFIERS. METHYL-DNA-IMMUNOPRECIPITATION IN THE VHPC REVEALED DIFFERENTIAL METHYLATION OF THE EXONS 1(C) AND 1(F) OF THE GR GENE (NR3C1) IN HMET FEMALES. TOGETHER, WE REPORT BEHAVIORAL AND ENDOCRINOLOGICAL SEX DIFFERENCES IN RESPONSE TO CORT, AS WELL AS EPIGENETIC SIGNATURES THAT I) DIFFER IN THE DHPC AND VHPC,II) ARE DISTINCT IN MALES AND FEMALES, AND III) IMPLICATE DIFFERENTIAL METHYLATION OF NR3C1 SELECTIVELY IN HMET FEMALES.	2022	
                                                                                                                                                                                                                                                                                                                                                                                                                                                 
16 6411  36 THE SITE SPECIFIC DEMETHYLATION IN THE 5'-REGULATORY AREA OF NMDA RECEPTOR 2B SUBUNIT GENE ASSOCIATED WITH CIE-INDUCED UP-REGULATION OF TRANSCRIPTION. BACKGROUND: THE NMDA RECEPTOR REPRESENTS A PARTICULARLY IMPORTANT SITE OF ETHANOL ACTION IN THE CNS. WE RECENTLY REPORTED THAT NMDA RECEPTOR 2B (NR2B) GENE EXPRESSION WAS PERSISTENTLY UP-REGULATED FOLLOWING CHRONIC INTERMITTENT ETHANOL (CIE) TREATMENT. INCREASING EVIDENCE THAT EPIGENETIC MECHANISMS ARE INVOLVED IN DYNAMIC AND LONG-LASTING REGULATION OF GENE EXPRESSION IN MULTIPLE NEUROADAPTIVE PROCESSES PROMPTED US TO INVESTIGATE THE ROLE OF DNA METHYLATION IN MEDIATING CIE-INDUCED UP-REGULATION OF NR2B GENE TRANSCRIPTION. TO DISSECT THE CHANGES OF DNA METHYLATION IN THE NR2B GENE, WE HAVE SCREENED A LARGE NUMBER OF CPG SITES WITHIN ITS 5'-REGULATORY AREA FOLLOWING CIE TREATMENT. METHODS: PRIMARY CORTICAL CULTURED NEURONS WERE SUBJECTED TO ETHANOL TREATMENT IN A CIE PARADIGM. BISULFITE CONVERSION FOLLOWED BY PYROSEQUENCING WAS USED FOR QUANTITATIVE MEASUREMENT AND ANALYSIS OF CPG METHYLATION STATUS WITHIN THE 5'-REGULATORY AREA OF THE NR2B GENE; CHROMATIN IMMUNOPRECIPITATION (CHIP) ASSAY WAS USED TO EXAMINE DNA LEVELS ASSOCIATED WITH METHYLATION AND TRANSCRIPTION FACTOR BINDING. ELECTROPHORETIC MOBILITY SHIFT ASSAY (EMSA) AND IN VITRO DNA METHYLATION ASSAYS WERE PERFORMED TO DETERMINE THE DIRECT IMPACT OF DNA METHYLATION ON THE INTERACTION BETWEEN DNA AND TRANSCRIPTION FACTOR AND PROMOTER ACTIVITY. RESULTS: ANALYSIS OF INDIVIDUAL CPG METHYLATION SITES WITHIN THE NR2B 5'REGULATORY AREA REVEALED THREE REGIONS WITH CLUSTERS OF SITE-SPECIFIC CPG DEMETHYLATION FOLLOWING CIE TREATMENT AND WITHDRAWAL. THIS WAS CONFIRMED BY CHIP SHOWING SIMILAR DECREASES OF METHYLATED DNA IN THE SAME REGIONS. THE CIE-INDUCED DEMETHYLATION IS CHARACTERIZED BY BEING LOCATED NEAR CERTAIN TRANSCRIPTION FACTOR BINDING SEQUENCES, AP-1 AND CRE, AND OCCURRED DURING TREATMENT AS WELL AS AFTER ETHANOL WITHDRAWAL. FURTHERMORE, THE INCREASE IN VITRO OF METHYLATED DNA DECREASED TRANSCRIPTION FACTOR BINDING ACTIVITY AND PROMOTER ACTIVITY. AN ADDITIONAL CHIP ASSAY INDICATED THAT THE CIE-INDUCED DNA DEMETHYLATION IS ACCOMPANIED BY INCREASED OCCUPATION BY TRANSCRIPTION FACTORS. CONCLUSIONS: THESE RESULTS SUGGEST AN IMPORTANT ROLE OF DNA DEMETHYLATION IN MEDIATING CIE-INDUCED NR2B GENE UP-REGULATION, THUS IMPLICATING A NOVEL MOLECULAR SITE OF ALCOHOL ACTION.	2010	
                                                                                                                                                                                                                                                                                                    
17 5339  27 QUETIAPINE TREATMENT REVERSES DEPRESSIVE-LIKE BEHAVIOR AND REDUCES DNA METHYLTRANSFERASE ACTIVITY INDUCED BY MATERNAL DEPRIVATION. STRESS IN EARLY LIFE HAS BEEN APPOINTED AS AN IMPORTANT PHENOMENON IN THE ONSET OF DEPRESSION AND POOR RESPONSE TO TREATMENT WITH CLASSICAL ANTIDEPRESSANTS. FURTHERMORE, CHILDHOOD TRAUMA TRIGGERS EPIGENETIC CHANGES, WHICH ARE ASSOCIATED WITH THE PATHOPHYSIOLOGY OF MAJOR DEPRESSIVE DISORDER (MDD). TREATMENT WITH ATYPICAL ANTIPSYCHOTICS SUCH AS QUETIAPINE, EXERTS THERAPEUTIC EFFECT FOR MDD PATIENTS AND INDUCES EPIGENETIC CHANGES. THIS STUDY AIMED TO ANALYZE THE EFFECT OF CHRONIC TREATMENT WITH QUETIAPINE (20MG/KG) ON DEPRESSIVE-LIKE BEHAVIOR OF RATS SUBMITTED TO MATERNAL DEPRIVATION (MD), AS WELL AS THE ACTIVITY OF HISTONE ACETYLATION BY THE ENZYMES HISTONE ACETYL TRANSFERASES (HAT) AND DEACETYLASES (HDAC) AND DNA METHYLATION, THROUGH DNA METHYLTRANSFERASE ENZYME (DNMT) IN THE PREFRONTAL CORTEX (PFC), NUCLEUS ACCUMBENS (NAC) AND HIPPOCAMPUS. MATERNALLY DEPRIVED RATS HAD A DEPRESSIVE-LIKE BEHAVIOR IN THE FORCED SWIMMING TEST AND AN INCREASE IN THE HDAC AND DNMT ACTIVITIES IN THE HIPPOCAMPUS AND NAC. TREATMENT WITH QUETIAPINE REVERSED DEPRESSIVE-LIKE BEHAVIOR AND REDUCED THE DNMT ACTIVITY IN THE HIPPOCAMPUS. THIS IS THE FIRST STUDY TO SHOW THE ANTIDEPRESSANT-LIKE EFFECT OF QUETIAPINE IN ANIMALS SUBJECTED TO MD AND A PROTECTIVE EFFECT BY QUETIAPINE IN REDUCING EPIGENETIC CHANGES INDUCED BY STRESS IN EARLY LIFE. THESE RESULTS REINFORCE AN IMPORTANT ROLE OF QUETIAPINE AS THERAPY FOR MDD.	2017	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
18 6082  29 THE EFFECT OF MORPHINE UPON DNA METHYLATION IN TEN REGIONS OF THE RAT BRAIN. MORPHINE IS ONE OF THE MOST EFFECTIVE ANALGESICS IN MEDICINE. HOWEVER, ITS USE IS ASSOCIATED WITH THE DEVELOPMENT OF TOLERANCE AND DEPENDENCE. RECENT STUDIES DEMONSTRATING EPIGENETIC CHANGES IN THE BRAIN AFTER EXPOSURE TO OPIATES HAVE PROVIDED INSIGHT INTO MECHANISMS POSSIBLY UNDERLYING ADDICTION. IN THIS STUDY, WE SOUGHT TO IDENTIFY EPIGENETIC CHANGES IN TEN REGIONS OF THE RAT BRAIN FOLLOWING ACUTE AND CHRONIC MORPHINE EXPOSURE. WE ANALYZED DNA METHYLATION OF SIX NUCLEAR-ENCODED GENES IMPLICATED IN BRAIN FUNCTION (BDNF, COMT, IL1B, IL6, NR3C1, AND TNF) AND THREE MITOCHONDRIALLY-ENCODED GENES (MTCO1, MTCO2, AND MTCO3), AND MEASURED GLOBAL 5-METHYLCYTOSINE (5MC) AND 5-HYDROXYMETHYLCYTOSINE (5 HMC) LEVELS. WE OBSERVED DIFFERENTIAL METHYLATION OF BDNF AND IL6 IN THE PONS, NR3C1 IN THE CEREBELLUM, AND IL1B IN THE HIPPOCAMPUS IN RESPONSE TO ACUTE MORPHINE EXPOSURE (ALL P VALUE < 0.05). CHRONIC EXPOSURE WAS ASSOCIATED WITH DIFFERENTIAL METHYLATION OF BDNF AND COMT IN THE PONS, NR3C1 IN THE HIPPOCAMPUS AND IL1B IN THE MEDULLA OBLONGATA (ALL P VALUE < 0.05). GLOBAL 5MC LEVELS SIGNIFICANTLY DECREASED IN THE SUPERIOR COLLICULUS FOLLOWING BOTH ACUTE AND CHRONIC MORPHINE EXPOSURE, AND INCREASED IN THE HYPOTHALAMUS FOLLOWING CHRONIC EXPOSURE. CHRONIC EXPOSURE WAS ALSO ASSOCIATED WITH SIGNIFICANTLY INCREASED GLOBAL 5HMC LEVELS IN THE CEREBRAL CORTEX, HIPPOCAMPUS, AND HYPOTHALAMUS, BUT SIGNIFICANTLY DECREASED IN THE MIDBRAIN. OUR RESULTS DEMONSTRATE, FOR THE FIRST TIME, HIGHLY LOCALIZED EPIGENETIC CHANGES IN THE RAT BRAIN FOLLOWING ACUTE AND CHRONIC MORPHINE EXPOSURE. FURTHER WORK IS REQUIRED TO ELUCIDATE THE POTENTIAL ROLE OF THESE CHANGES IN THE FORMATION OF TOLERANCE AND DEPENDENCE.	2017	
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
19 1903  36 ENHANCED NEUROINFLAMMATION MEDIATED BY DNA METHYLATION OF THE GLUCOCORTICOID RECEPTOR TRIGGERS COGNITIVE DYSFUNCTION AFTER SEVOFLURANE ANESTHESIA IN ADULT RATS SUBJECTED TO MATERNAL SEPARATION DURING THE NEONATAL PERIOD. BACKGROUND: MOUNTING EVIDENCE INDICATES THAT CHILDREN WHO EXPERIENCE ABUSE AND NEGLECT ARE PRONE TO CHRONIC DISEASES AND PREMATURE MORTALITY LATER IN LIFE. ONE MECHANISTIC HYPOTHESIS FOR THIS PHENOMENON IS THAT EARLY LIFE ADVERSITY ALTERS THE EXPRESSION OR FUNCTIONING OF THE GLUCOCORTICOID RECEPTOR (GR) THROUGHOUT THE COURSE OF LIFE AND THEREBY INCREASES SENSITIVITY TO INFLAMMATORY STIMULATION. AN EXAGGERATED PRO-INFLAMMATORY RESPONSE IS GENERALLY CONSIDERED TO BE A KEY CAUSE OF POSTOPERATIVE COGNITIVE DYSFUNCTION (POCD). THE AIM OF THIS STUDY WAS TO EXAMINE THE EFFECTS OF EARLY LIFE ADVERSITY ON COGNITIVE FUNCTION AND NEUROINFLAMMATION AFTER SEVOFLURANE ANESTHESIA IN ADULT RATS AND TO DETERMINE WHETHER SUCH EFFECTS ARE ASSOCIATED WITH THE EPIGENETIC REGULATION OF GR. METHODS: WISTAR RAT PUPS WERE REPEATEDLY SUBJECTED TO INFANT MATERNAL SEPARATION (EARLY LIFE STRESS) FROM POSTNATAL DAYS 2-21. IN ADULTHOOD, THEIR BEHAVIOR AND THE SIGNALING OF HIPPOCAMPAL PRO-INFLAMMATORY FACTORS AND NUCLEAR FACTOR-KAPPA B (NF-KAPPAB) AFTER SEVOFLURANE ANESTHESIA WERE EVALUATED. WE ALSO EXAMINED THE EFFECTS OF MATERNAL SEPARATION (MS) ON THE EXPRESSION OF GR AND THE DNA METHYLATION STATUS OF THE PROMOTER REGION OF EXON 1(7) OF GR AND WHETHER BEHAVIORAL CHANGES AND NEUROINFLAMMATION AFTER ANESTHESIA WERE REVERSIBLE WHEN THE EXPRESSION OF GR WAS INCREASED BY ALTERING DNA METHYLATION. RESULTS: MS INDUCED COGNITIVE DECLINE AFTER SEVOFLURANE INHALATION IN THE MORRIS WATER MAZE AND CONTEXT FEAR CONDITIONING TESTS AND ENHANCED THE RELEASE OF CYTOKINES AND THE ACTIVATION OF ASTROCYTE INTRACELLULAR NF-KAPPAB SIGNALING INDUCED BY SEVOFLURANE IN THE HIPPOCAMPUS OF ADULT RATS. BLOCKING NF-KAPPAB SIGNALING BY PYRROLIDINE DITHIOCARBAMATE (PDTC) INHIBITED THE RELEASE OF CYTOKINES. MS ALSO REDUCED THE EXPRESSION OF GR AND UPREGULATED THE METHYLATION LEVELS OF THE PROMOTER REGION OF GR EXON 1(7), AND SUCH EFFECTS WERE REVERSED BY TREATMENT WITH THE HISTONE DEACETYLASE INHIBITOR TRICHOSTATIN A (TSA) IN ADULT RATS. MOREOVER, TSA TREATMENT IN ADULT MS RATS INHIBITED THE OVERACTIVATION OF ASTROCYTE INTRACELLULAR NF-KAPPAB SIGNALING AND THE RELEASE OF CYTOKINES AND ALLEVIATED COGNITIVE DYSFUNCTION AFTER SEVOFLURANE ANESTHESIA. CONCLUSIONS: EARLY LIFE STRESS INDUCES COGNITIVE DYSFUNCTION AFTER SEVOFLURANE ANESTHESIA, PERHAPS DUE TO THE ABERRANT METHYLATION OF THE GR GENE PROMOTER, WHICH REDUCES THE EXPRESSION OF THE GR GENE AND FACILITATES EXAGGERATED INFLAMMATORY RESPONSES.	2017	

20 1808  35 EFFECTS OF ADOLESCENT SOCIAL STRESS AND ANTIDEPRESSANT TREATMENT ON COGNITIVE INFLEXIBILITY AND BDNF EPIGENETIC MODIFICATIONS IN THE MPFC OF ADULT MICE. ADOLESCENT SOCIAL STRESS (ASS) CAN INCREASE SUSCEPTIBILITY TO DEPRESSION IN ADULTHOOD. HOWEVER, THE UNDERLYING PSYCHOLOGICAL AND NEURAL MECHANISMS REMAIN UNCLEAR. CORTICALLY MEDIATED COGNITIVE DYSFUNCTIONS ARE INCREASINGLY RECOGNIZED AS AN INDEPENDENT AND IMPORTANT RISK FACTOR OF DEPRESSION. USING SOCIAL DEFEAT STRESS, A CLASSICAL ANIMAL MODEL OF DEPRESSION, OUR PREVIOUS STUDIES FOUND THAT MICE SUBJECTED TO THIS FORM OF STRESS DURING EARLY ADOLESCENCE DISPLAYED COGNITIVE INFLEXIBILITY (CI) IN ADULTHOOD. THIS CHANGE WAS ACCOMPANIED BY A DOWN-REGULATION OF BDNF GENE EXPRESSION IN THE MEDIAL PREFRONTAL CORTEX (MPFC); THIS GENE ENCODES A KEY MOLECULE INVOLVED IN DEPRESSION AND ANTIDEPRESSANT ACTION. IN THE PRESENT PAPER, WE IDENTIFIED EPIGENETIC MODIFICATION OF BDNF AS A POSSIBLE MECHANISM UNDERLYING THE BEHAVIORAL AND MOLECULAR CHANGES. ASS INDUCED A SET OF DEPRESSIVE PHENOTYPES, INCLUDING INCREASED SOCIAL AVOIDANCE AND CI, AS WELL AS REDUCED LEVELS OF TOTAL BDNF AND ISOFORM IV BUT NOT ISOFORM I OR VI TRANSCRIPTS IN THE MPFC. IN PARALLEL WITH CHANGES IN BDNF GENE EXPRESSION, PREVIOUSLY STRESSED ADULT MICE SHOWED INCREASED LEVELS OF DIMETHYLATION OF HISTONE H3 AT LYSINE K9 (H3K9ME2) IMMEDIATELY DOWNSTREAM OF THE BDNF IV PROMOTER. ON THE OTHER HAND, NO DIFFERENCES WERE FOUND IN TRIMETHYLATION OF HISTONE H3 AT LYSINE K4 (H3K4ME3) OR IN ACETYLATION OF HISTONE H3 AT LYSINE K9 (H3K9AC) OR AT K4 (H3K4AC) IN THE BDNF IV PROMOTER. LIKEWISE, NO ALTERATIONS WERE FOUND IN DNA METHYLATION OF THE BDNF IV PROMOTER. ADDITIONALLY, TREATMENT WITH THE CHRONIC ANTIDEPRESSANT TRANYLCYPROMINE REVERSED BDNF EPIGENETIC CHANGES AND RELATED GENE TRANSCRIPTION WHILE ALSO REVERSING CI, BUT NOT SOCIAL AVOIDANCE, IN PREVIOUSLY STRESSED ADULT MICE. THESE RESULTS SUGGEST THAT EPIGENETIC CHANGES TO THE BDNF GENE IN THE MPFC AFTER ADOLESCENT SOCIAL ADVERSITY MAY BE INVOLVED IN THE REGULATION OF COGNITIVE DYSFUNCTION IN DEPRESSION AND ANTIDEPRESSANT ACTION IN ADULTHOOD.	2018